RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 AASSQ9UDR5 926 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 MYO15AQ9UKN7 3530 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
CLIC4-202ENST00000488683 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 TCRBV5S2A0A599 114 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 ZNF840PA6NDX5 716 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 SYCE1LA8MT33 242 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 STX16O14662 325 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 NOBOXO60393 691 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 DFNA5O60443 496 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 CLDN7O95471 211 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 GSNP06396 782 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 PYGLP06737 847 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 TFPTP0C1Z6 253 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 IL10P22301 178 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 POLR2IP36954 125 aaKnown RBP12.5□□□□□ -0.41
CLIC4-202ENST00000488683 RPL38P63173 70 aaKnown RBP12.5□□□□□ -0.41
CLIC4-202ENST00000488683 SREBF2Q12772 1141 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 MAP7Q14244 749 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 ENPP6Q6UWR7 440 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 GOLGA7Q7Z5G4 137 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 FIG4Q92562 907 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 GFM2Q969S9 779 aaKnown RBP12.5□□□□□ -0.41
CLIC4-202ENST00000488683 TTLL2Q9BWV7 592 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 GPR63Q9BZJ6 419 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 PNPLA3Q9NST1 481 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
CLIC4-202ENST00000488683 UROSP10746 265 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GJA1P17302 382 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CD247P20963 164 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 PRKACGP22612 351 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 PSMA3P25788 255 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 SLC11A2P49281 568 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 PMS2P3Q13401 168 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 IRAK1BP1Q5VVH5 260 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GALNT10Q86SR1 603 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ANKRD46Q86W74 232 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TTC30BQ8N4P2 665 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 NKAPQ8N5F7 415 aaKnown RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 DDI1Q8WTU0 396 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■■■■■ 27.5
CLIC4-202ENST00000488683 HSPBAP1Q96EW2 488 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 BRINP2Q9C0B6 783 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 STARD7Q9NQZ5 370 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GIPC1O14908 333 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CLOCKO15516 846 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CLDN11O75508 207 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 SLC2A4P14672 509 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TM4SF4P48230 202 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CLCN7P51798 805 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 KPNA1P52294 538 aaPredicted RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 BNIP2Q12982 314 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 INPP5AQ14642 412 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 NKG7Q16617 165 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ANKDD1AQ495B1 522 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ATP6AP1LQ52LC2 224 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TXNDC8Q6A555 127 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 GLYATQ6IB77 296 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TPGS1Q6ZTW0 290 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 LRRC8DQ7L1W4 858 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 PARP8Q8N3A8 854 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TMEM199Q8N511 208 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 EGFL8Q99944 293 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TTPALQ9BTX7 342 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CHID1Q9BWS9 393 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 TRIM54Q9BYV2 358 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 IPPKQ9H8X2 491 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 CLK4Q9HAZ1 481 aaKnown RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 VAPAQ9P0L0 249 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 RSL24D1Q9UHA3 163 aaKnown RBP12.49□□□□□ -0.41
CLIC4-202ENST00000488683 VPS4AQ9UN37 437 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 U3KQV3 271 aa12.49□□□□□ -0.41
CLIC4-202ENST00000488683 ILVBLA1L0T0 632 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 MAN1A2O60476 641 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 EEDO75530 441 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 CA8P35219 290 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 CSKP41240 450 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ALDH3B2P48448 385 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 RHOAP61586 193 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 SF1Q15637 639 aaKnown RBP12.48□□□□□ -0.41
CLIC4-202ENST00000488683 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 COQ5Q5HYK3 327 aa12.48□□□□□ -0.41
CLIC4-202ENST00000488683 ACBD5Q5T8D3 534 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms