RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 LEMD2Q8NC56 503 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 NOA1Q8NC60 698 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 KCTD6Q8NC69 237 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PDPRQ8NCN5 879 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 TMIEQ8NEW7 156 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 SPATA4Q8NEY3 305 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 MDGA1Q8NFP4 955 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 CMASQ8NFW8 434 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 OR52N2Q8NGI0 321 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 SCAMP5Q8TAC9 235 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 ZNF461Q8TAF7 563 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 STT3BQ8TCJ2 826 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 ARNTL2Q8WYA1 636 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 RAPGEF5Q92565 580 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 NDRG1Q92597 394 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 MRPS31Q92665 395 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 CENPIQ92674 756 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 CASP10Q92851 521 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 MAGOHBQ96A72 148 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 HAUS1Q96CS2 278 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 CHFRQ96EP1 664 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PGAP3Q96FM1 320 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 MS4A14Q96JA4 679 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 CCDC114Q96M63 670 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 KLHL5Q96PQ7 755 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PEBP4Q96S96 227 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 NELL2Q99435 816 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 FERMT1Q9BQL6 677 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 CLSTN3Q9BQT9 956 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 RHOXF2Q9BQY4 288 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 ZNF670Q9BS34 389 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 C17orf80Q9BSJ5 609 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 HEMGNQ9BXL5 484 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 AP1M1Q9BXS5 423 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 MAK16Q9BXY0 300 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 DCLK3Q9C098 648 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 RAB17Q9H0T7 212 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 LMAN2LQ9H0V9 348 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PCDHAC1Q9H158 963 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 TP63Q9H3D4 680 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 SEPSECSQ9HD40 501 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 ITM2CQ9NQX7 267 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 ASAH2Q9NR71 780 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PIGVQ9NUD9 493 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.38□□□□□ -2.03
LBR-208ENST00000488632 FBXO34Q9NWN3 711 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 PLA2G3Q9NZ20 509 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 SMARCAL1Q9NZC9 954 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 RCOR3Q9P2K3 495 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 C11orf21Q9P2W6 132 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 SLC12A6Q9UHW9 1150 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 LSM7Q9UK45 103 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 FBXO9Q9UK97 447 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 MTO1Q9Y2Z2 717 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 HBS1LQ9Y450 684 aaKnown RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 DTNAQ9Y4J8 743 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 RAD54BQ9Y620 910 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 V9GYY5 206 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 ARHGEF17Q96PE2 2063 aaPredicted RBP2.38□□□□□ -2.03
LBR-208ENST00000488632 HEATR5BQ9P2D3 2071 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 CDH23Q9H251 3354 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 BDP1A6H8Y1 2624 aa2.38□□□□□ -2.03
LBR-208ENST00000488632 TMEM131Q92545 1883 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MDC1Q14676 2089 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 TRAV19A0A0A6YYK7 116 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC195A0A1B0GUA6 201 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 TYW5A2RUC4 315 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 CCDC151A5D8V7 595 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ZNF840PA6NDX5 716 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 OR2W5A6NFC9 320 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 AQP12BA6NM10 295 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HIDE1A8MVS5 230 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 E9PLN8 166 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 F5H5T6 163 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 H0YGN5 161 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 H3BNC9 293 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 H7C0C1 242 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 J3KRW8 73 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 APOC4-APOC2K7ER74 178 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 SGK1O00141 431 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 CCL16O15467 120 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 TTI1O43156 1089 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 MSI1O43347 362 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 RAD51CO43502 376 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 RGS10O43665 173 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 RRP9O43818 475 aaKnown RBP2.37□□□□□ -2.03
LBR-208ENST00000488632 MFSD11O43934 449 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PIAS2O75928 621 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 FAM155BO75949 473 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 STC2O76061 302 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 ACTL6BO94805 426 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 AGR2O95994 175 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 VIPP01282 170 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 APOC2P02655 101 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 FYNP06241 537 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 PYGLP06737 847 aa2.37□□□□□ -2.03
LBR-208ENST00000488632 HMBSP08397 361 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms