RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 SNX17Q15036 470 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 FAM110CQ1W6H9 321 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 CYHR1Q6ZMK1 362 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 PHACTR4Q8IZ21 702 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.33
ABCA2-219ENST00000488535 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 KIF17Q9P2E2 1029 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 OR12D3Q9UGF7 316 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 TNFSF13BQ9Y275 285 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 DOCK3Q8IZD9 2030 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 MAGEB16A2A368 324 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 PRMT5O14744 637 aaPredicted RBP12.96□□□□□ -0.33
ABCA2-219ENST00000488535 RBP1P09455 135 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 DDX5P17844 614 aaKnown RBP12.96□□□□□ -0.33
ABCA2-219ENST00000488535 HRH2P25021 359 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 NUDT6P53370 316 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 SNRPD2P62316 118 aaKnown RBP12.96□□□□□ -0.33
ABCA2-219ENST00000488535 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.33
ABCA2-219ENST00000488535 SCN3BQ9NY72 215 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 ITM2BQ9Y287 266 aa12.96□□□□□ -0.33
ABCA2-219ENST00000488535 DPYSL4O14531 572 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 TREHO43280 583 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 MGEA5O60502 916 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 TKTL1P51854 596 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.34
ABCA2-219ENST00000488535 CDKN2DP55273 166 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 SLC25A52Q3SY17 297 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 UNC50Q53HI1 259 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 RBM48Q5RL73 367 aaKnown RBP12.96□□□□□ -0.34
ABCA2-219ENST00000488535 ATPAF2Q8N5M1 289 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 AURKBQ96GD4 344 aaPredicted RBP12.96□□□□□ -0.34
ABCA2-219ENST00000488535 Q96MT0 163 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 PSD2Q9BQI7 771 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 ACTR8Q9H981 624 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 NTN4Q9HB63 628 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 COMMD8Q9NX08 183 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 EIF3LQ9Y262 564 aaKnown RBP12.96□□□□□ -0.34
ABCA2-219ENST00000488535 NME7Q9Y5B8 376 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 OAS3Q9Y6K5 1087 aaKnown RBP12.96□□□□□ -0.34
ABCA2-219ENST00000488535 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.34
ABCA2-219ENST00000488535 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SLC22A1O15245 554 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 UPK1BO75841 260 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CRYZL1O95825 349 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 HADHAP40939 763 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 AGTR2P50052 363 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PPP5CP53041 499 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ENPEPQ07075 957 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ZNF678Q5SXM1 525 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SLC38A6Q8IZM9 456 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ATP6V0D2Q8N8Y2 350 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 TP53I13Q8NBR0 393 aaPredicted RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 BLOC1S5Q8TDH9 187 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PTERQ96BW5 349 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SLC47A1Q96FL8 570 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ZFP14Q9HCL3 533 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 TLR9Q9NR96 1032 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 NSMCE4AQ9NXX6 385 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 VWA7Q9Y334 891 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 TESMINQ9Y4I5 508 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 A0A087X1B8 175 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 AIREO43918 545 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CSF2P04141 144 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ANXA6P08133 673 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PRSS56P0CW18 603 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 HSD17B1P14061 328 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 PFKLP17858 780 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 POLD2P49005 469 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 GNASQ5JWF2 1037 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CYP20A1Q6UW02 462 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 HDAC2Q92769 488 aaKnown RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 MUL1Q969V5 352 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 WDCPQ9H6R7 721 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 RUBCNLQ9H714 662 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ZMYM5Q9UJ78 669 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 RNF112Q9ULX5 631 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 BTBD3Q9Y2F9 522 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 WBP11Q9Y2W2 641 aaKnown RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CCDC162PA2VCL2 907 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 SMIM30A4D0T7 59 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 TSPAN1O60635 241 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 CHRM5P08912 532 aaPredicted RBP12.95□□□□□ -0.34
ABCA2-219ENST00000488535 WEE1P30291 646 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 ADRA1BP35368 520 aa12.95□□□□□ -0.34
ABCA2-219ENST00000488535 DGKEP52429 567 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms