RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 AMPHP49418 695 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 CLNS1AP54105 237 aaKnown RBP4.23□□□□□ -1.73
ITGB1-214ENST00000488427 TAS2R40P59535 323 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 KRT32Q14532 448 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 ASPRV1Q53RT3 343 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 CYP20A1Q6UW02 462 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 FOXL2NBQ6ZUU3 175 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 PXKQ7Z7A4 578 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 CUZD1Q86UP6 607 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 FOXRED2Q8IWF2 684 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 NGEFQ8N5V2 710 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 IL17RCQ8NAC3 791 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 OR1J2Q8NGS2 313 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 SPATA3Q8NHX4 192 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 SCFD2Q8WU76 684 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 IGSF8Q969P0 613 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 PGAM5Q96HS1 289 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 LMLNQ96KR4 655 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 DOCK7Q96N67 2140 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 SCPEP1Q9HB40 452 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 KLHL20Q9Y2M5 609 aa4.23□□□□□ -1.73
ITGB1-214ENST00000488427 SCN11AQ9UI33 1791 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 ABCC6O95255 1503 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 DOT1LQ8TEK3 1739 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 TOGARAM1Q9Y4F4 1720 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 A0A0G2JLW4 131 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 C16orf97H3BN30 126 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 DVL1O14640 695 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 TGFB1I1O43294 461 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 FGF17O60258 216 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 TMCC2O75069 709 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 MLYCDO95822 493 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 CD4P01730 458 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 NR2F2P24468 414 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 ICAM3P32942 547 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 MAP2K2P36507 400 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 MMP14P50281 582 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 DVL1P1P54792 670 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-214ENST00000488427 PHEXP78562 749 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 RELQ04864 619 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-214ENST00000488427 GTF2H2Q13888 395 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 CDONQ4KMG0 1287 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 ZNF805Q5CZA5 627 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 HAUS3Q68CZ6 603 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 GTF2H2CQ6P1K8 395 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 PAPD4Q6PIY7 484 aaKnown RBP4.22□□□□□ -1.73
ITGB1-214ENST00000488427 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 ZNF441Q8N8Z8 693 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 DMBX1Q8NFW5 382 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 TMEM255BQ8WV15 326 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 ABTB1Q969K4 478 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-214ENST00000488427 SKA1Q96BD8 255 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 C1orf74Q96LT6 269 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 TTC14Q96N46 770 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 PDZD7Q9H5P4 517 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 EIF2B3Q9NR50 452 aaKnown RBP4.22□□□□□ -1.73
ITGB1-214ENST00000488427 POLG2Q9UHN1 485 aa4.22□□□□□ -1.73
ITGB1-214ENST00000488427 KDM6AO15550 1401 aaPredicted RBP4.21□□□□□ -1.73
ITGB1-214ENST00000488427 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 PI4KAP2A4QPH2 592 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 FAM72CH0Y354 149 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 BMPR1BO00238 502 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 ZNHIT1O43257 154 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 HS6ST1O60243 411 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 ZBED4O75132 1171 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 SRPRAP08240 638 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 FAM106CPP0CH98 169 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 CDH1P12830 882 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 UGT1A1P22309 533 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 DLX5P56178 289 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 SREBF2Q12772 1141 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 AIMP2Q13155 320 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 CCNYL2Q5T2Q4 361 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 FAM72AQ5TYM5 149 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 FAM72DQ6L9T8 149 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 TRMT1LQ7Z2T5 733 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 FAM72BQ86X60 149 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 RPAP2Q8IXW5 612 aaPredicted RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 C1orf87Q8N0U7 546 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 BEST3Q8N1M1 668 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 KCNN2Q9H2S1 579 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 SYNCQ9H7C4 482 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 EPB41L5Q9HCM4 733 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 KLHL1Q9NR64 748 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 DONSONQ9NYP3 566 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 CNOT8Q9UFF9 292 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 KCNS2Q9ULS6 477 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 R3HDM2Q9Y2K5 976 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 PSAT1Q9Y617 370 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 ADAMTSL1Q8N6G6 1762 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 SLIT3O75094 1523 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 EEA1Q15075 1411 aa4.21□□□□□ -1.74
ITGB1-214ENST00000488427 PDS5AQ29RF7 1337 aaKnown RBP4.21□□□□□ -1.74
ITGB1-214ENST00000488427 ZDBF2Q9HCK1 2354 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 SPTBN5Q9NRC6 3674 aaKnown RBP4.2□□□□□ -1.74
ITGB1-214ENST00000488427 PGPEP1LA6NFU8 196 aa4.2□□□□□ -1.74
ITGB1-214ENST00000488427 ZNF587BE7ETH6 402 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms