RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SCHIP1Q9P0W5 487 aaPredicted RBP10.85□□□□□ -0.67
UBE4B-210ENST00000488228 NFU1Q9UMS0 254 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 PSMD13Q9UNM6 376 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 CRYL1Q9Y2S2 319 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 ANKRD12Q6UB98 2062 aa10.85□□□□□ -0.67
UBE4B-210ENST00000488228 ADAMTS20P59510 1910 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 SNRNP200O75643 2136 aaKnown RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 KIF26BQ2KJY2 2108 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 TRBV23OR9-2A0A075B6M9 112 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 MGAT4DA6NG13 374 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 OR52A4PA6NMU1 304 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 TNFSF14O43557 240 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 S1PR4O95977 384 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 OR56A5P0C7T3 313 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 FTH1P19P0C7X4 201 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CKMT1AP12532 417 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CEACAM1P13688 526 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 BRAFP15056 766 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 FMO4P31512 558 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PPARGP37231 505 aaPredicted RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 MAGEA4P43358 317 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CSE1LP55060 971 aaKnown RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 GPX6P59796 221 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CBLBQ13191 982 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CUL1Q13616 776 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF658BQ4V348 819 aaPredicted RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 SYTL3Q4VX76 610 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PTRHD1Q6GMV3 140 aaKnown RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 ZNF761Q86XN6 746 aaPredicted RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CNTN4Q8IWV2 1026 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 OR2L2Q8NH16 312 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 IFI44Q8TCB0 444 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CALML6Q8TD86 181 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 ELMO1Q92556 727 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CCDC74AQ96AQ1 378 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 LINC00615Q96LM1 132 aaPredicted RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 BIRC8Q96P09 236 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 CCM2Q9BSQ5 444 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 FOXP3Q9BZS1 431 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 WWP1Q9H0M0 922 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 VPS37BQ9H9H4 285 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 SMYD2Q9NRG4 433 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 INTS10Q9NVR2 710 aaKnown RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 WDR37Q9Y2I8 494 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PSAT1Q9Y617 370 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 RNF215Q9Y6U7 377 aa10.84□□□□□ -0.67
UBE4B-210ENST00000488228 V9GYY5 206 aaPredicted RBP10.84□□□□□ -0.67
UBE4B-210ENST00000488228 PRAMEF33A0A0G2JMD5 474 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 QSOX1O00391 747 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 TRIM16O95361 564 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SLU7O95391 586 aaKnown RBP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 FTH1P02794 183 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SLC35G4P0C7Q5 338 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 MYBL2P10244 700 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CKMT2P17540 419 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 IDSP22304 550 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 ACP1P24666 158 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 RPIAP49247 311 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CLCNKAP51800 687 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CLDN6P56747 220 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 MGAT5Q09328 741 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 BRD3Q15059 726 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 ZNF549Q6P9A3 640 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 OGFOD3Q6PK18 319 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 GLRX5Q86SX6 157 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SLCO6A1Q86UG4 719 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 LRRC6Q86X45 466 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 PALM2Q8IXS6 379 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 LMNTD2Q8IXW0 634 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CFAP206Q8IYR0 622 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 ARL14Q8N4G2 192 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 C2CD4AQ8NCU7 369 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 MAPK15Q8TD08 544 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 GLMNQ92990 594 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 ATXN7L3BQ96GX2 97 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 TCF12Q99081 682 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 NDNQ99608 321 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 FAM129AQ9BZQ8 928 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 SYNDIG1Q9H7V2 258 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 IMP3Q9NV31 184 aaKnown RBP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 NINJ2Q9NZG7 142 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 NCKIPSDQ9NZQ3 722 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 ZFATQ9P243 1243 aa10.83□□□□□ -0.68
UBE4B-210ENST00000488228 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
UBE4B-210ENST00000488228 CFAP20Q9Y6A4 193 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms