RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RHPN2P1A8MT19 583 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 ZW10O43264 779 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 GSTA2P09210 222 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 CKMT1AP12532 417 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 MYF5P13349 255 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 F3P13726 295 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 ITGB6P18564 788 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 RPL10P27635 214 aaKnown RBP15.45■□□□□ 0.06
C9orf3-219ENST00000488186 SLC1A2P43004 574 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 PPM1FP49593 454 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-219ENST00000488186 MGAT5Q09328 741 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 DNAJC3Q13217 504 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 FRG1Q14331 258 aaKnown RBP15.45■□□□□ 0.06
C9orf3-219ENST00000488186 NFE2L1Q14494 772 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 TYSND1Q2T9J0 566 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 C14orf28Q4W4Y0 310 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 PPM1JQ5JR12 505 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 OGFOD3Q6PK18 319 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 C11orf96Q7Z7L8 435 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 SLC9B2Q86UD5 537 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 DENND6AQ8IWF6 608 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 TRIM48Q8IWZ4 208 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 SLC35F3Q8IY50 421 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 KYQ8NBH2 561 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 HM13Q8TCT9 377 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 CDKL2Q92772 493 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 PANX3Q96QZ0 392 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 NFU1Q9UMS0 254 aa15.45■□□□□ 0.06
C9orf3-219ENST00000488186 APOBEC2Q9Y235 224 aaKnown RBP15.45■□□□□ 0.06
C9orf3-219ENST00000488186 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-219ENST00000488186 E5RI56 91 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 GIPC1O14908 333 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 SGTAO43765 313 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 SPAG6O75602 509 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 DKK1O94907 266 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 S1PR4O95977 384 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 ESR1P03372 595 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 SLC35G4P0C7Q5 338 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 CDK4P11802 303 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 CHRM3P20309 590 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 RPS3P23396 243 aaKnown RBP eCLIP15.44■□□□□ 0.06
C9orf3-219ENST00000488186 SSTR1P30872 391 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 DMPKQ09013 629 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 KRT33BQ14525 404 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 BRD3Q15059 726 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 TMED2Q15363 201 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 METRNLQ641Q3 311 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 IYDQ6PHW0 289 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 KIAA0408Q6ZU52 694 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 AVL9Q8NBF6 648 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-219ENST00000488186 GPR156Q8NFN8 814 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 UBXN4Q92575 508 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 LPGAT1Q92604 370 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 NAT6Q93015 286 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 CXorf40BQ96DE9 158 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 WDR83Q9BRX9 315 aaKnown RBP15.44■□□□□ 0.06
C9orf3-219ENST00000488186 ABCG4Q9H172 646 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 SARS2Q9NP81 518 aaKnown RBP15.44■□□□□ 0.06
C9orf3-219ENST00000488186 NSMCE4AQ9NXX6 385 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 TXNDC16Q9P2K2 825 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 LRIT1Q9P2V4 623 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 PSMD13Q9UNM6 376 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 NCOR2Q9Y618 2525 aa15.44■□□□□ 0.06
C9orf3-219ENST00000488186 KIR2DS5A0A0G2JLQ3 304 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 A0A0G2JNG1 304 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 KIR2DS3K7RE56 304 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 IFRD1O00458 451 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 LIN7AO14910 233 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 KPNA5O15131 536 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 NOBOXO60393 691 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 HAUS5O94927 633 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 VIPP01282 170 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 APOA4P06727 396 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 PKMP14618 531 aaKnown RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 GLB1P16278 677 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 ACP1P24666 158 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 PHBP35232 272 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 MAZP56270 477 aaKnown RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 MPP1Q00013 466 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 PLOD1Q02809 727 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 BOP1Q14137 746 aaKnown RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 KIR2DS5Q14953 304 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 SLMAPQ14BN4 828 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 AGAP9Q5VTM2 703 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 WASH2PQ6VEQ5 465 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 FAM83HQ6ZRV2 1179 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 OTOAQ7RTW8 1153 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 EFL1Q7Z2Z2 1120 aaKnown RBP15.43■□□□□ 0.06
C9orf3-219ENST00000488186 NAGSQ8N159 534 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 ARL14Q8N4G2 192 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 IFI44Q8TCB0 444 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 TMEM159Q96B96 161 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 SH3KBP1Q96B97 665 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 P2RY12Q9H244 342 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 COG4Q9H9E3 785 aa15.43■□□□□ 0.06
C9orf3-219ENST00000488186 WASH6PQ9NQA3 447 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms