RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 PDP2Q9P2J9 529 aa12.65□□□□□ -0.38
RPSA-208ENST00000487876 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
RPSA-208ENST00000487876 PCDHGA7Q9Y5G6 932 aa12.65□□□□□ -0.38
RPSA-208ENST00000487876 IGLV3-16A0A075B6K0 115 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 CCDC162PA2VCL2 907 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 MGAT4DA6NG13 374 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 FGF3P11487 239 aaPredicted RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 ATP1B2P14415 290 aaPredicted RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 HALP42357 657 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 PRLHRP49683 370 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 TERF1P54274 439 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 TRA2AQ13595 282 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPSA-208ENST00000487876 TGIF1Q15583 401 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 TRIP13Q15645 432 aaPredicted RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 RPE65Q16518 533 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 DBN1Q16643 649 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 GPR33Q49SQ1 333 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 METRNLQ641Q3 311 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 TTC27Q6P3X3 843 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 TAS2R42Q7RTR8 314 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 GSTA5Q7RTV2 222 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 FAM129CQ86XR2 697 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 SLC35F6Q8N357 371 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 AVL9Q8NBF6 648 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 OR2L2Q8NH16 312 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 MAIP1Q8WWC4 291 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 INSM2Q96T92 566 aaPredicted RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 DPYSL5Q9BPU6 564 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 PRORYQ9H606 182 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 DRG1Q9Y295 367 aaKnown RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 JRKLQ9Y4A0 524 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 DNMT3AQ9Y6K1 912 aaPredicted RBP12.64□□□□□ -0.39
RPSA-208ENST00000487876 ATRXP46100 2492 aa12.64□□□□□ -0.39
RPSA-208ENST00000487876 MN1Q10571 1320 aaPredicted RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 HEATR9A2RTY3 570 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 USP27XA6NNY8 438 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 EFCAB7A8K855 629 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 NVLO15381 856 aaKnown RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 KCNJ13O60928 360 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 UBXN7O94888 489 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 POLBP06746 335 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 RALBP11234 206 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 PSMA3P25788 255 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 MSNP26038 577 aaKnown RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 FOXN2P32314 431 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 CSTF2P33240 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPSA-208ENST00000487876 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 PPP1CAP62136 330 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 CXADRP78310 365 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 CRADDP78560 199 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 BASP1P80723 227 aaKnown RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 CACNG1Q06432 222 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 ARHGAP22Q7Z5H3 698 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 AGBL5Q8NDL9 886 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 COG1Q8WTW3 980 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 ART4Q93070 314 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 LINC00615Q96LM1 132 aaPredicted RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 RMDN2Q96LZ7 410 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 FCRL3Q96P31 734 aaPredicted RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 TGM7Q96PF1 710 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 AP1M1Q9BXS5 423 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 IMP3Q9NV31 184 aaKnown RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 AKAP7Q9P0M2 348 aaPredicted RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
RPSA-208ENST00000487876 TCAF1Q9Y4C2 921 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 PRSS21Q9Y6M0 314 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
RPSA-208ENST00000487876 PIEZO2Q9H5I5 2752 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 TCRBV7S3A2A0A539 114 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 CFAP99D6REC4 459 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 GOT2P00505 430 aaKnown RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 MTHFD1P11586 935 aaKnown RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 CAPZBP47756 277 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 VPS41P49754 854 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 SESN2P58004 480 aaPredicted RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 ZNF658BQ4V348 819 aaPredicted RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 ZNF534Q76KX8 674 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 CFAP206Q8IYR0 622 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 RASGEF1CQ8N431 466 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 HDAC10Q969S8 669 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 C12orf66Q96MD2 445 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 CTRCQ99895 268 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 EPB41L1Q9H4G0 881 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
RPSA-208ENST00000487876 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
RPSA-208ENST00000487876 ZNF185O15231 689 aa12.61□□□□□ -0.39
RPSA-208ENST00000487876 KIF1CO43896 1103 aaKnown RBP12.61□□□□□ -0.39
RPSA-208ENST00000487876 OR1I1O60431 355 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms