RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 P2RY6Q15077 328 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 DPCR1Q3MIW9 517 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 CYP4A22Q5TCH4 519 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 ALS2CLQ60I27 953 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 ZNF534Q76KX8 674 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 ESX1Q8N693 406 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 ZNF383Q8NA42 475 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 TMEM116Q8NCL8 245 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 RRP36Q96EU6 259 aaKnown RBP3.65□□□□□ -1.83
SMC4-219ENST00000487747 GIMAP5Q96F15 307 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 SCLT1Q96NL6 688 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 ZNF300Q96RE9 604 aaPredicted RBP3.65□□□□□ -1.83
SMC4-219ENST00000487747 COQ3Q9NZJ6 369 aa3.65□□□□□ -1.83
SMC4-219ENST00000487747 IGHV4-4A0A075B6R2 117 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 CCDC196A0A1B0GTZ2 297 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 C15orf62A8K5M9 175 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 MAP2K7O14733 419 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 SLC25A12O75746 678 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 CSTF3Q12996 717 aaKnown RBP3.64□□□□□ -1.83
SMC4-219ENST00000487747 CCNG2Q16589 344 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 SOWAHCQ53LP3 525 aaPredicted RBP3.64□□□□□ -1.83
SMC4-219ENST00000487747 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 CYP20A1Q6UW02 462 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 DENND5BQ6ZUT9 1274 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 ARMC8Q8IUR7 673 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 ZKSCAN4Q969J2 545 aaPredicted RBP3.64□□□□□ -1.83
SMC4-219ENST00000487747 ZUFSPQ96AP4 578 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 MAP7D2Q96T17 732 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 SEPT5Q99719 369 aaPredicted RBP3.64□□□□□ -1.83
SMC4-219ENST00000487747 LUZP4Q9P127 313 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 ZHX2Q9Y6X8 837 aa3.64□□□□□ -1.83
SMC4-219ENST00000487747 IGHV4-61A0A0C4DH41 118 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 PRR32B1ATL7 298 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 DNM1LO00429 736 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 AP2A2O94973 939 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 IGHV4-59P01825 116 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 ZBED6P86452 979 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 MVPQ14764 893 aaKnown RBP3.63□□□□□ -1.83
SMC4-219ENST00000487747 FASTKD5Q7L8L6 764 aaKnown RBP3.63□□□□□ -1.83
SMC4-219ENST00000487747 TSPAN33Q86UF1 283 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 DNAJC22Q8N4W6 341 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 GSDMBQ8TAX9 411 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 KCNG4Q8TDN1 519 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 ZNRF4Q8WWF5 429 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 SMARCE1Q969G3 411 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 TRIM51Q9BSJ1 452 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 FGFBP2Q9BYJ0 223 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 TAS2R10Q9NYW0 307 aa3.63□□□□□ -1.83
SMC4-219ENST00000487747 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
SMC4-219ENST00000487747 ACP2P11117 423 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 ACADSP16219 412 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 ACADLP28330 430 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 SHC1P29353 583 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 CCT5P48643 541 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 RPL7AP62424 266 aaKnown RBP3.62□□□□□ -1.83
SMC4-219ENST00000487747 CTU2Q2VPK5 515 aaKnown RBP3.62□□□□□ -1.83
SMC4-219ENST00000487747 TMEM198Q66K66 360 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 ACAD10Q6JQN1 1059 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 TMEM178AQ8NBL3 297 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 HJURPQ8NCD3 748 aaPredicted RBP3.62□□□□□ -1.83
SMC4-219ENST00000487747 OR2T11Q8NH01 316 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 FAM149B1Q96BN6 582 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 AGAP3Q96P47 875 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 SYT15Q9BQS2 421 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 SLA2Q9H6Q3 261 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 INTS9Q9NV88 658 aaKnown RBP3.62□□□□□ -1.83
SMC4-219ENST00000487747 MIOSQ9NXC5 875 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 TAB2Q9NYJ8 693 aa3.62□□□□□ -1.83
SMC4-219ENST00000487747 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
SMC4-219ENST00000487747 IPO7O95373 1038 aaKnown RBP3.61□□□□□ -1.83
SMC4-219ENST00000487747 NFKBIAP25963 317 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 NAB2Q15742 525 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 ADIPOQQ15848 244 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 UGP2Q16851 508 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 ZNF774Q6NX45 483 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 RNF168Q8IYW5 571 aaPredicted RBP3.61□□□□□ -1.83
SMC4-219ENST00000487747 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 ZFAND2BQ8WV99 257 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 WASH6PQ9NQA3 447 aa3.61□□□□□ -1.83
SMC4-219ENST00000487747 TRMT1Q9NXH9 659 aaKnown RBP3.61□□□□□ -1.83
SMC4-219ENST00000487747 FAM237BA0A1B0GVD1 139 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 SLCO1B7G3V0H7 640 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 HCRTR2O43614 444 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 EDN1P05305 212 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 SPARCP09486 303 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 XBP1P17861 261 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 TLX1P31314 330 aaPredicted RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 BIRC3Q13489 604 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 HNRNPDQ14103 355 aaKnown RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 RRS1Q15050 365 aaKnown RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 MEP1AQ16819 746 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 DCAF10Q5QP82 559 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 CORO6Q6QEF8 472 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 IL27RAQ6UWB1 636 aa3.6□□□□□ -1.83
SMC4-219ENST00000487747 R3HCC1LQ7Z5L2 792 aaKnown RBP3.6□□□□□ -1.83
SMC4-219ENST00000487747 GALNT13Q8IUC8 556 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms