RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GJA1P17302 382 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 HOXB6P17509 224 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 RHDQ02161 417 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 TGFBIQ15582 683 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 FAM174BQ3ZCQ3 159 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 INO80DQ53TQ3 878 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 KRT78Q8N1N4 520 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 LEMD2Q8NC56 503 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 SLC13A3Q8WWT9 602 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ERLEC1Q96DZ1 483 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 BACE2Q9Y5Z0 518 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 IQCF5A8MTL0 148 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 H3BM21 787 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 PABPC1P11940 636 aaKnown RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 NCK1P16333 377 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 POU1F1P28069 291 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 RPL3P39023 403 aaKnown RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CRATP43155 626 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ACADVLP49748 655 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 NAE1Q13564 534 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 LIX1Q8N485 282 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 FBXO27Q8NI29 283 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CANT1Q8WVQ1 401 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 POLR1BQ9H9Y6 1135 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ZDHHC3Q9NYG2 299 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CLCA2Q9UQC9 943 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 KIF13BQ9NQT8 1826 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CAPN14A8MX76 684 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 HHLA1C9JL84 531 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 FGBP02675 491 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 PRPS2P11908 318 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 PCSK2P16519 638 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 PPP2R1BP30154 601 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 MAPK9P45984 424 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 TM4SF4P48230 202 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CHIT1Q13231 466 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 DSC3Q14574 896 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CARD16Q5EG05 197 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ZNF789Q5FWF6 425 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 FAM43BQ6ZT52 329 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CMTM8Q8IZV2 173 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CSGALNACT1Q8TDX6 532 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 SLC47A1Q96FL8 570 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 LRRC3Q9BY71 257 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CEP44Q9C0F1 390 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 EPS8L2Q9H6S3 715 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ARNT2Q9HBZ2 717 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ZIM2Q9NZV7 527 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 DEC1Q9P2X7 70 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 TRPC4Q9UBN4 977 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CORO2BQ9UQ03 480 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ATAD5Q96QE3 1844 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 INPPL1O15357 1258 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 BCL10O95999 233 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 GSNP06396 782 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ACRP10323 421 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 FDXRP22570 491 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 RANBP1P43487 201 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 UNC50Q53HI1 259 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 LRRC73Q5JTD7 316 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CYP20A1Q6UW02 462 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ADGRG6Q86SQ4 1221 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 KDM1BQ8NB78 822 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 UTP15Q8TED0 518 aaKnown RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 RORBQ92753 470 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CEP295NLQ96MC4 621 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 TUBGCP5Q96RT8 1024 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 EXOSC4Q9NPD3 245 aaKnown RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 GIMAP2Q9UG22 337 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ASF1AQ9Y294 204 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 DOCK5Q9H7D0 1870 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 IL6P05231 212 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CXCR2P25025 360 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 S100A5P33763 92 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 ATP4BP51164 291 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 RFX4Q33E94 735 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 CAPN13Q6MZZ7 669 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-214ENST00000487615 DDHD1Q8NEL9 900 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 QRFPRQ96P65 431 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 FEM1AQ9BSK4 669 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 MEAF6Q9HAF1 191 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 SGK2Q9HBY8 427 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 TREX1Q9NSU2 369 aa11.64□□□□□ -0.55
TRA2B-214ENST00000487615 A0A1W2PP18 115 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 FAM20BO75063 409 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 TULP3O75386 442 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 CLTBP09497 229 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 PPIBP23284 216 aaKnown RBP11.63□□□□□ -0.55
TRA2B-214ENST00000487615 PSMB9P28065 219 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 EEFSECP57772 596 aaKnown RBP11.63□□□□□ -0.55
TRA2B-214ENST00000487615 RPS14P62263 151 aaKnown RBP11.63□□□□□ -0.55
TRA2B-214ENST00000487615 ECT2LQ008S8 904 aa11.63□□□□□ -0.55
TRA2B-214ENST00000487615 SFSWAPQ12872 951 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms