RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MCEMP1Q8IX19 187 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 TEX11Q8IYF3 940 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 TMTC2Q8N394 836 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 OR10V1Q8NGI7 309 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 FAM76AQ8TAV0 307 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 GRAPLQ8TC17 118 aaPredicted RBP3.86□□□□□ -1.79
LINC00888-204ENST00000487386 FCAMRQ8WWV6 532 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
LINC00888-204ENST00000487386 ZNF354BQ96LW1 612 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 CHCHD6Q9BRQ6 235 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 ZHX3Q9H4I2 956 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 DNAJB4Q9UDY4 337 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
LINC00888-204ENST00000487386 CEP162Q5TB80 1403 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 GAPVD1Q14C86 1478 aa3.86□□□□□ -1.79
LINC00888-204ENST00000487386 PCF11O94913 1555 aaKnown RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 SMIM1B2RUZ4 78 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 PLK4O00444 970 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 RB1P06400 928 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 LIPFP07098 398 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 TUBBP07437 444 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 CLTBP09497 229 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 MSH3P20585 1137 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 PSMB10P40306 273 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ARF3P61204 181 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 TUBB4BP68371 445 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ARF1P84077 181 aaKnown RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ZDHHC20Q5W0Z9 365 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 CEACAM20Q6UY09 585 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 DGLUCYQ7Z3D6 616 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 PTOV1Q86YD1 416 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ARID3BQ8IVW6 561 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 SCYL3Q8IZE3 742 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 LRRC59Q96AG4 307 aaKnown RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 STAMBPL1Q96FJ0 436 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 TREX2Q9BQ50 279 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 SEMA6AQ9H2E6 1030 aa3.85□□□□□ -1.79
LINC00888-204ENST00000487386 APOBEC3GQ9HC16 384 aaKnown RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 MBNL1Q9NR56 388 aaKnown RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ZNF624Q9P2J8 865 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 ZNF608Q9ULD9 1512 aaPredicted RBP3.85□□□□□ -1.79
LINC00888-204ENST00000487386 CFAP43Q8NDM7 1665 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 PTGES3LE9PB15 166 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 EDIL3O43854 480 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 PCDH7O60245 1069 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 DOK2O60496 412 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 SYNCRIPO60506 623 aaKnown RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 TSHBP01222 138 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 ERVK-10P10266 1014 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 SUOXP51687 545 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 NR0B1P51843 470 aaKnown RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 MRPS5P82675 430 aaKnown RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 SIM2Q14190 667 aaPredicted RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 TMEM30BQ3MIR4 351 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 ZC2HC1CQ53FD0 456 aaPredicted RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 NDUFAF5Q5TEU4 345 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 SFMBT2Q5VUG0 894 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 GALNT5Q7Z7M9 940 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 TRPT1Q86TN4 253 aaKnown RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 STPG4Q8N801 248 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 ZNF473Q8WTR7 871 aaKnown RBP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 TM9SF4Q92544 642 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 MOAP1Q96BY2 351 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 LGALS12Q96DT0 336 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 HGH1Q9BTY7 390 aa3.84□□□□□ -1.79
LINC00888-204ENST00000487386 FTOQ9C0B1 505 aaKnown RBP eCLIP3.84□□□□□ -1.79
LINC00888-204ENST00000487386 GRIN2BQ13224 1484 aa3.84□□□□□ -1.8
LINC00888-204ENST00000487386 MAGI1Q96QZ7 1491 aaPredicted RBP3.84□□□□□ -1.8
LINC00888-204ENST00000487386 PRXQ9BXM0 1461 aa3.84□□□□□ -1.8
LINC00888-204ENST00000487386 EFCAB5A4FU69 1503 aa3.84□□□□□ -1.8
LINC00888-204ENST00000487386 IQGAP2Q13576 1575 aa3.84□□□□□ -1.8
LINC00888-204ENST00000487386 AGAP14A8MT82 685 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 BLOC1S5-TXNDC5H3BN57 136 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 NTN3O00634 580 aaPredicted RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 VILLO15195 856 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 NDUFS4O43181 175 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 MITFO75030 526 aaPredicted RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 ZBED4O75132 1171 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 KRT19P08727 400 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 PRLRP16471 622 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 PPP2R2BQ00005 443 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 DLG2Q15700 870 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 CNBD1Q8NA66 436 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 CCDC34Q96HJ3 373 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 DDOQ99489 341 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 LITAFQ99732 161 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 POLR3GLQ9BT43 218 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 RBM4Q9BWF3 364 aaKnown RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 PPIL3Q9H2H8 161 aaKnown RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 DENND2DQ9H6A0 471 aaPredicted RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 SLA2Q9H6Q3 261 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 SCRT2Q9NQ03 307 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 SLC38A7Q9NVC3 462 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 SEC63Q9UGP8 760 aaKnown RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 JRKLQ9Y4A0 524 aa3.83□□□□□ -1.8
LINC00888-204ENST00000487386 ASTN2O75129 1339 aaPredicted RBP3.83□□□□□ -1.8
LINC00888-204ENST00000487386 SAMD9Q5K651 1589 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms