RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 LDLRAP1Q5SW96 308 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZDHHC20Q5W0Z9 365 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 IYDQ6PHW0 289 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF574Q6ZN55 896 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 USP53Q70EK8 1073 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF534Q76KX8 674 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SLITRK4Q8IW52 837 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 PIANPQ8IYJ0 282 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 RASGEF1CQ8N431 466 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 LILRA3Q8N6C8 439 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 OR13J1Q8NGT2 312 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 DTX3LQ8TDB6 740 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 UBE2Q2Q8WVN8 375 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SGF29Q96ES7 293 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 PRR11Q96HE9 360 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF778Q96MU6 729 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 OSBPL9Q96SU4 736 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 NRSN2Q9GZP1 204 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TSPAN10Q9H1Z9 355 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SEMA6CQ9H3T2 930 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ASB8Q9H765 288 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 EPB41L5Q9HCM4 733 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ASCL3Q9NQ33 180 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 CASS4Q9NQ75 786 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 NLE1Q9NVX2 485 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 DKK4Q9UBT3 224 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 FAM8A1Q9UBU6 413 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SLC2A6Q9UGQ3 507 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 FEZ2Q9UHY8 353 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 TTC7AQ9ULT0 858 aaPredicted RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 DRG1Q9Y295 367 aaKnown RBP7.04□□□□□ -1.28
UBE4B-209ENST00000487244 WDR37Q9Y2I8 494 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 ZKSCAN5Q9Y2L8 839 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
UBE4B-209ENST00000487244 SNRNP200O75643 2136 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 IGHV1OR21-1A0A087WYE8 117 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 TRBV5-4A0A0C4DH59 114 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CCDC162PA2VCL2 907 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 OR52A4PA6NMU1 304 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ERI2A8K979 691 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 AGAP14A8MT82 685 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PDZK1P1A8MUH7 402 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PGRMC1O00264 195 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ZSCAN12O43309 604 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PNLIPP16233 465 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ITGALP20701 1170 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 MPSTP25325 297 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ACTN2P35609 894 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 FASLGP48023 281 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 LMAN1P49257 510 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CLCNKAP51800 687 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PSMA6P60900 246 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 UBE2IP63279 158 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 BASP1P80723 227 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 HHEXQ03014 270 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ZFP36L1Q07352 338 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CDH17Q12864 832 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 GTF2H3Q13889 308 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 NFE2L1Q14494 772 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CLCA4Q14CN2 919 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 MAP9Q49MG5 647 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ZRANB3Q5FWF4 1079 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 FNBP1LQ5T0N5 605 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ANKRD22Q5VYY1 191 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 TMEM220Q6QAJ8 160 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PPP1R21Q6ZMI0 780 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 LINC00523Q86TU6 105 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 NXPE1Q8N323 547 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 C17orf53Q8N3J3 647 aaPredicted RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 DNAAF3Q8N9W5 541 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 RCBTB1Q8NDN9 531 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 OR6C4Q8NGE1 309 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 GPR150Q8NGU9 434 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 JPH3Q8WXH2 748 aaPredicted RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 TTC25Q96NG3 672 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 TIMM29Q9BSF4 260 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 TBC1D10AQ9BXI6 508 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ZCCHC2Q9C0B9 1178 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 POLR1BQ9H9Y6 1135 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 KCNK4Q9NYG8 393 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PAK5Q9P286 719 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF624Q9P2J8 865 aaPredicted RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CPNE7Q9UBL6 633 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 CRLS1Q9UJA2 301 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 RALYQ9UKM9 306 aaKnown RBP7.03□□□□□ -1.28
UBE4B-209ENST00000487244 SNX12Q9UMY4 172 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 PSMD13Q9UNM6 376 aa7.03□□□□□ -1.28
UBE4B-209ENST00000487244 IGLV3-16A0A075B6K0 115 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 KIR2DS5A0A0G2JLQ3 304 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 A0A0G2JNG1 304 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 IGHV5-10-1A0A0J9YXX1 117 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 H7C0S8 307 aa7.02□□□□□ -1.29
UBE4B-209ENST00000487244 KIR2DS3K7RE56 304 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms