RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 LDB2O43679 373 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 CDK14O94921 469 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 CAPN3P20807 821 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 CDH3P22223 829 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 IL4RP24394 825 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ZNF165P49910 485 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 JAM2P57087 298 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 POLR2FP61218 127 aaKnown RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 OGDHQ02218 1023 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ABRQ12979 859 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 XRCC4Q13426 336 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ZNF169Q14929 603 aaPredicted RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 ALS2CLQ60I27 953 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ALG1LQ6GMV1 187 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 CERS6Q6ZMG9 384 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ZNF808Q8N4W9 903 aaPredicted RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 TEX26Q8N6G2 289 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 BCORP1Q8N888 145 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 MLKLQ8NB16 471 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ANKRD20A12PQ8NF67 263 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 GPR150Q8NGU9 434 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 CNDP1Q96KN2 507 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 SMIM14Q96QK8 99 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 PEBP4Q96S96 227 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 PCDHB18PQ96TA0 734 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 TLR10Q9BXR5 811 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ADGRE3Q9BY15 652 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ZCCHC2Q9C0B9 1178 aaKnown RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 GANQ9H2C0 597 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ZFYVE1Q9HBF4 777 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ARFGAP3Q9NP61 516 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 NLRC4Q9NPP4 1024 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 OLAHQ9NV23 265 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 IMP3Q9NV31 184 aaKnown RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 NFKBIL1Q9UBC1 381 aaPredicted RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 TRIM10Q9UDY6 481 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 SLC23A2Q9UGH3 650 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 NDOR1Q9UHB4 597 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 MDC1Q14676 2089 aaKnown RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.22
PDPN-205ENST00000487038 SEC16AO15027 2179 aa7.46□□□□□ -1.22
PDPN-205ENST00000487038 DOCK10Q96BY6 2186 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SLC9B1P1A6NJY1 282 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ANKRD66B4E2M5 251 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 DIAPH2O60879 1101 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SLC4A1P02730 911 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 CAPN1P07384 714 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SNRPB2P08579 225 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 CCDC172P0C7W6 258 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 MSL3P1P0C860 447 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 CD1EP15812 388 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 EEF1GP26641 437 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 HTR1EP28566 365 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 MIPP30301 263 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SOX8P57073 446 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 OTUD4Q01804 1114 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 DSC2Q02487 901 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 AIMP2Q13155 320 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 TLR1Q15399 786 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 DPYSL2Q16555 572 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ZNF630Q2M218 657 aaPredicted RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 PTCHD3Q3KNS1 767 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ANO6Q4KMQ2 910 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 HSP90AA4PQ58FG1 418 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 FKBP15Q5T1M5 1219 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ZNF648Q5T619 568 aaPredicted RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 FAM69BQ5VUD6 431 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 AGAP7PQ5VUJ5 663 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 LCN10Q6JVE6 187 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 B4GALNT4Q76KP1 1039 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 MRGPRGQ86SM5 289 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 CDH24Q86UP0 819 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 AMZ2Q86W34 360 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 GPR135Q8IZ08 494 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 MCOLN2Q8IZK6 566 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDPN-205ENST00000487038 BEND7Q8N7W2 519 aaPredicted RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 GDAP1Q8TB36 358 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 DNAJB14Q8TBM8 379 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 BRSK1Q8TDC3 778 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 CPLX3Q8WVH0 158 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 ITLN2Q8WWU7 325 aaPredicted RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 N4BP2L2Q92802 583 aaPredicted RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 RELTQ969Z4 430 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 AGAP4Q96P64 663 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 GBP5Q96PP8 586 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 VPS35Q96QK1 796 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 AGPAT1Q99943 283 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SLX1AQ9BQ83 275 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 TRIM8Q9BZR9 551 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 XPO4Q9C0E2 1151 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 C1GALT1Q9NS00 363 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 P4HTMQ9NXG6 502 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 SERTAD3Q9UJW9 196 aa7.45□□□□□ -1.22
PDPN-205ENST00000487038 PTRH2Q9Y3E5 179 aaKnown RBP7.45□□□□□ -1.22
PDPN-205ENST00000487038 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
PDPN-205ENST00000487038 MTX2O75431 263 aa7.44□□□□□ -1.22
PDPN-205ENST00000487038 JRKO75564 520 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms