RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMTC1Q8IUR5 882 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 CDKL3Q8IVW4 592 aaPredicted RBP24.03■■□□□ 1.44
LIME1-206ENST00000487026 CCDC110Q8TBZ0 833 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 KLHL6Q8WZ60 621 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 ALG3Q92685 438 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 FERMT1Q9BQL6 677 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 EFHD1Q9BUP0 239 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 IMP3Q9NV31 184 aaKnown RBP24.03■■□□□ 1.44
LIME1-206ENST00000487026 SMOXQ9NWM0 555 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 RPS6KL1Q9Y6S9 549 aa24.03■■□□□ 1.44
LIME1-206ENST00000487026 SUV39H1O43463 412 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 KIAA0754O94854 1291 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 WISP1O95388 367 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 OAS2P29728 719 aaKnown RBP24.02■■□□□ 1.44
LIME1-206ENST00000487026 RWDD2BP57060 319 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 KCNC4Q03721 635 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 CDC20Q12834 499 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 KCNAB2Q13303 367 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 LONRF2Q1L5Z9 754 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 DEFB109BQ30KR1 87 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 METRNLQ641Q3 311 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 PTRH1Q86Y79 214 aaKnown RBP24.02■■□□□ 1.44
LIME1-206ENST00000487026 ACRBPQ8NEB7 543 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 OR13C4Q8NGS5 318 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 STARD8Q92502 1023 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 CATSPER2Q96P56 530 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 INSM2Q96T92 566 aaPredicted RBP24.02■■□□□ 1.44
LIME1-206ENST00000487026 WWP1Q9H0M0 922 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 FAM96AQ9H5X1 160 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 EFR3BQ9Y2G0 817 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 AAR2Q9Y312 384 aaKnown RBP24.02■■□□□ 1.44
LIME1-206ENST00000487026 MYO18BQ8IUG5 2567 aa24.02■■□□□ 1.44
LIME1-206ENST00000487026 ZNF106Q9H2Y7 1883 aaKnown RBP24.02■■□□□ 1.44
LIME1-206ENST00000487026 IGHV5-51A0A0C4DH38 117 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 CCDC66A2RUB6 948 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 SRP72O76094 671 aaKnown RBP24.01■■□□□ 1.43
LIME1-206ENST00000487026 NELFEP18615 380 aaKnown RBP24.01■■□□□ 1.43
LIME1-206ENST00000487026 PTPN7P35236 360 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 XIAPP98170 497 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 MSLNQ13421 630 aaPredicted RBP24.01■■□□□ 1.43
LIME1-206ENST00000487026 PRPSAP1Q14558 356 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 IL11RAQ14626 422 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 PLCL1Q15111 1095 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 DUS1LQ6P1R4 473 aaKnown RBP24.01■■□□□ 1.43
LIME1-206ENST00000487026 MICALCLQ6ZW33 695 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 SPDYE1Q8NFV5 336 aaPredicted RBP24.01■■□□□ 1.43
LIME1-206ENST00000487026 RAB33BQ9H082 229 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 RBSNQ9H1K0 784 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 ADNPQ9H2P0 1102 aa24.01■■□□□ 1.43
LIME1-206ENST00000487026 C5orf60A6NFR6 353 aa24■■□□□ 1.43
LIME1-206ENST00000487026 MGAT4DA6NG13 374 aa24■■□□□ 1.43
LIME1-206ENST00000487026 CCL22O00626 93 aa24■■□□□ 1.43
LIME1-206ENST00000487026 SPAG6O75602 509 aa24■■□□□ 1.43
LIME1-206ENST00000487026 STK10O94804 968 aaKnown RBP24■■□□□ 1.43
LIME1-206ENST00000487026 MTHFD1P11586 935 aaKnown RBP24■■□□□ 1.43
LIME1-206ENST00000487026 FGF5P12034 268 aa24■■□□□ 1.43
LIME1-206ENST00000487026 TCN2P20062 427 aa24■■□□□ 1.43
LIME1-206ENST00000487026 DLSTP36957 453 aa24■■□□□ 1.43
LIME1-206ENST00000487026 MAP7Q14244 749 aa24■■□□□ 1.43
LIME1-206ENST00000487026 KCNAB1Q14722 419 aa24■■□□□ 1.43
LIME1-206ENST00000487026 CERS6Q6ZMG9 384 aa24■■□□□ 1.43
LIME1-206ENST00000487026 ATG14Q6ZNE5 492 aa24■■□□□ 1.43
LIME1-206ENST00000487026 MRFAP1L1Q96HT8 127 aa24■■□□□ 1.43
LIME1-206ENST00000487026 ZNF514Q96K75 400 aaPredicted RBP24■■□□□ 1.43
LIME1-206ENST00000487026 CLMPQ9H6B4 373 aa24■■□□□ 1.43
LIME1-206ENST00000487026 LNPEPQ9UIQ6 1025 aa24■■□□□ 1.43
LIME1-206ENST00000487026 CROTQ9UKG9 612 aa24■■□□□ 1.43
LIME1-206ENST00000487026 SGTAO43765 313 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 IPO7O95373 1038 aaKnown RBP23.99■■□□□ 1.43
LIME1-206ENST00000487026 POLBP06746 335 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 FOLR1P15328 257 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 DENND5AQ6IQ26 1287 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 LILRA3Q8N6C8 439 aaPredicted RBP23.99■■□□□ 1.43
LIME1-206ENST00000487026 LRRC57Q8N9N7 239 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 OR2L2Q8NH16 312 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 STAMBPL1Q96FJ0 436 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 CALR3Q96L12 384 aaKnown RBP23.99■■□□□ 1.43
LIME1-206ENST00000487026 C12orf66Q96MD2 445 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 SPATA13Q96N96 652 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 MAP3K3Q99759 626 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 TBL1YQ9BQ87 522 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 CRLS1Q9UJA2 301 aa23.99■■□□□ 1.43
LIME1-206ENST00000487026 GRID2IPA4D2P6 1211 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 BTNL10A8MVZ5 291 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 TERTO14746 1132 aaKnown RBP23.98■■□□□ 1.43
LIME1-206ENST00000487026 TJP3O95049 919 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 TIAF1O95411 115 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 CRTAMO95727 393 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 KLHL35Q6PF15 583 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 PPP1R3BQ86XI6 285 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 CFAP206Q8IYR0 622 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 SIDT2Q8NBJ9 832 aaKnown RBP23.98■■□□□ 1.43
LIME1-206ENST00000487026 SLC41A2Q96JW4 573 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 ZNF71Q9NQZ8 489 aaPredicted RBP23.98■■□□□ 1.43
LIME1-206ENST00000487026 HRASLS2Q9NWW9 162 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 SEMA5BQ9P283 1151 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 ACSL5Q9ULC5 683 aa23.98■■□□□ 1.43
LIME1-206ENST00000487026 KATNA1O75449 491 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 EBLN1P0CF75 366 aa23.97■■□□□ 1.43
LIME1-206ENST00000487026 CETN2P41208 172 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms