RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 hCG_2039718K7EN88 272 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 CNOT3O75175 753 aaKnown RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 THP07101 528 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 PCYT1AP49585 367 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 COLEC12Q5KU26 742 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 KANK2Q63ZY3 851 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 PIANPQ8IYJ0 282 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 TOP6BLQ8N6T0 577 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 ATOH8Q96SQ7 321 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-211ENST00000486901 SPO11Q9Y5K1 396 aa12.23□□□□□ -0.45
HSPG2-211ENST00000486901 NDUFS2O75306 463 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 DNTTP04053 509 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ALDH3A2P51648 485 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ERVPABLB-1P60509 514 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 TP53BP2Q13625 1128 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 AP5B1Q2VPB7 878 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 FAM98BQ52LJ0 330 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 SLC16A12Q6ZSM3 486 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 SYTL1Q8IYJ3 562 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 OR4L1Q8NH43 312 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 RAB2BQ8WUD1 216 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 TRUB1Q8WWH5 349 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ROGDIQ9GZN7 287 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 GPC6Q9Y625 555 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 CCL15-CCL14A0A0B4J2E2 113 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 A0A0G2JLL6 359 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 SEC14L2O76054 403 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 CHEK2O96017 543 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 MMP2P08253 660 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 DBTP11182 482 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 HK3P52790 923 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 EMX1Q04741 257 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 MAPRE1Q15691 268 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 CCL15Q16663 113 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 CCDC92Q53HC0 331 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 Q6ZSR9 355 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PRRT2Q7Z6L0 340 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ALDH16A1Q8IZ83 802 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PACRGLQ8N7B6 248 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 OR2T12Q8NG77 320 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 LINGO1Q96FE5 620 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 SLC25A51Q9H1U9 297 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ACTR8Q9H981 624 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 HACD3Q9P035 362 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 LOC100506127A0A0U1RQW1 187 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 M0R129 80 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 KPNA4O00629 521 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 GABRDO14764 452 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PSMD3O43242 534 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PAPSS2O95340 614 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 LCKP06239 509 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 ZFP36L2P47974 494 aaKnown RBP12.22□□□□□ -0.45
HSPG2-211ENST00000486901 HCAR3P49019 387 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 TRIM32Q13049 653 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 PRKG2Q13237 762 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 RCAN2Q14206 197 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 RGMBQ6NW40 437 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 OR6K2Q8NGY2 324 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 HPS4Q9NQG7 708 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 GNPTGQ9UJJ9 305 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 DERAQ9Y315 318 aa12.22□□□□□ -0.45
HSPG2-211ENST00000486901 NDUFB5O43674 189 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 JRKO75564 520 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 ANXA6P08133 673 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 FCGR1AP12314 374 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 OR1E1P30953 314 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF235Q14590 738 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 ABRAXAS2Q15018 415 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 FAM214AQ32MH5 1076 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SPANXN4Q5MJ08 99 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 LAIR2Q6ISS4 152 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 PSAPL1Q6NUJ1 521 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SCD5Q86SK9 330 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 OR7D4Q8NG98 312 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 L3HYPDHQ96EM0 354 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SLC47A1Q96FL8 570 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 MBOAT4Q96T53 435 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 CGREF1Q99674 301 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SLC52A3Q9NQ40 469 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 ATAD3AQ9NVI7 634 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
HSPG2-211ENST00000486901 PRG3Q9Y2Y8 225 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-211ENST00000486901 SBF1O95248 1867 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms