RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 ABRAXAS1Q6UWZ7 409 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 PCGF5Q86SE9 256 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 CFAP206Q8IYR0 622 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 LILRA3Q8N6C8 439 aaPredicted RBP14.47□□□□□ -0.09
USP4-212ENST00000486549 MDM1Q8TC05 714 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 HM13Q8TCT9 377 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 ZNF592Q92610 1267 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 SH3KBP1Q96B97 665 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 AHCYL2Q96HN2 611 aaKnown RBP14.47□□□□□ -0.09
USP4-212ENST00000486549 LINC00615Q96LM1 132 aaPredicted RBP14.47□□□□□ -0.09
USP4-212ENST00000486549 NUDT22Q9BRQ3 303 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 CCM2Q9BSQ5 444 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 WWP1Q9H0M0 922 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 VPS37BQ9H9H4 285 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
USP4-212ENST00000486549 ENTPD2Q9Y5L3 495 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 CFAP20Q9Y6A4 193 aaKnown RBP14.47□□□□□ -0.09
USP4-212ENST00000486549 MAD1L1Q9Y6D9 718 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 AK5Q9Y6K8 562 aa14.47□□□□□ -0.09
USP4-212ENST00000486549 IGHV1OR21-1A0A087WYE8 117 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 AP2A2O94973 939 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 CPNE6O95741 557 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 SLC35G4P0C7Q5 338 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 PAMP19021 973 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 PPARGP37231 505 aaPredicted RBP14.46□□□□□ -0.09
USP4-212ENST00000486549 INHBCP55103 352 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 METRNLQ641Q3 311 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 DUS1LQ6P1R4 473 aaKnown RBP14.46□□□□□ -0.09
USP4-212ENST00000486549 WASH2PQ6VEQ5 465 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 PACS1Q6VY07 963 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 CERS6Q6ZMG9 384 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 TMPRSS9Q7Z410 1059 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 PIM3Q86V86 326 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 AVL9Q8NBF6 648 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 SPATA4Q8NEY3 305 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 OR10G6Q8NH81 332 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 TBC1D10AQ9BXI6 508 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.46□□□□□ -0.09
USP4-212ENST00000486549 COG4Q9H9E3 785 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 WASH6PQ9NQA3 447 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 IMP3Q9NV31 184 aaKnown RBP14.46□□□□□ -0.09
USP4-212ENST00000486549 IL1RAPL1Q9NZN1 696 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 ASPMQ8IZT6 3477 aa14.46□□□□□ -0.09
USP4-212ENST00000486549 KLHL33A6NCF5 533 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 EFCAB8A8MWE9 144 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 TAF4O00268 1085 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 QSOX1O00391 747 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 DUX1O43812 170 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 BANF1O75531 89 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 MPOP05164 745 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 OR56A5P0C7T3 313 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 ITGB6P18564 788 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 MPSTP25325 297 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 IVDP26440 423 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 ARNTP27540 789 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 CD1CP29017 333 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 CSF2RBP32927 897 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 MAGEA3P43357 314 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 PREPP48147 710 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 TTPAP49638 278 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 GABREP78334 506 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 RTP5Q14D33 572 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 BRD3Q15059 726 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 RPE65Q16518 533 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 PHF19Q5T6S3 580 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 KIAA0930Q6ICG6 404 aaPredicted RBP14.45□□□□□ -0.1
USP4-212ENST00000486549 XKR5Q6UX68 686 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 TMEM26Q6ZUK4 368 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 HOOK3Q86VS8 718 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 LSMEM2Q8N112 164 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 AGGF1Q8N302 714 aaeCLIP14.45□□□□□ -0.1
USP4-212ENST00000486549 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
USP4-212ENST00000486549 GPR150Q8NGU9 434 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 JPH3Q8WXH2 748 aaPredicted RBP14.45□□□□□ -0.1
USP4-212ENST00000486549 ELMO1Q92556 727 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 STAMBPL1Q96FJ0 436 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 SNF8Q96H20 258 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 SGSM3Q96HU1 749 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 RMDN2Q96LZ7 410 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 C12orf66Q96MD2 445 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 TMEM74Q96NL1 305 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 FCRL3Q96P31 734 aaPredicted RBP14.45□□□□□ -0.1
USP4-212ENST00000486549 INSM2Q96T92 566 aaPredicted RBP14.45□□□□□ -0.1
USP4-212ENST00000486549 SEMA6CQ9H3T2 930 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 POT1Q9NUX5 634 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 ACSL5Q9ULC5 683 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 SATB2Q9UPW6 733 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
USP4-212ENST00000486549 FAM237BA0A1B0GVD1 139 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 UBA6A0AVT1 1052 aaPredicted RBP14.44□□□□□ -0.1
USP4-212ENST00000486549 MAGEB16A2A368 324 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 PMS2P1A4D2B8 440 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 LILRA5A6NI73 299 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 RRP8O43159 456 aaKnown RBP14.44□□□□□ -0.1
USP4-212ENST00000486549 NDUFS3O75489 264 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 URI1O94763 535 aaPredicted RBP14.44□□□□□ -0.1
USP4-212ENST00000486549 FTH1P02794 183 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 MTHFD1P11586 935 aaKnown RBP14.44□□□□□ -0.1
USP4-212ENST00000486549 ITGA8P53708 1063 aa14.44□□□□□ -0.1
USP4-212ENST00000486549 GPLD1P80108 840 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms