RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 SCRN2Q96FV2 425 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 DHRS4Q9BTZ2 278 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 ZDHHC3Q9NYG2 299 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 SLC23A2Q9UGH3 650 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 PADI2Q9Y2J8 665 aa8.04□□□□□ -1.12
XRN1-212ENST00000486211 SEC16AO15027 2179 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 A0A1B0GVL5 298 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 TLCD2A6NGC4 264 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 POM121CA8CG34 1229 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 GOLGA8SH3BPF8 625 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 NUAK1O60285 661 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 SOCS5O75159 536 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CNOT3O75175 753 aaKnown RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 ALOX12BO75342 701 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 PALMO75781 387 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 WISP2O76076 250 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 PYGLP06737 847 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CDH5P33151 784 aaPredicted RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 SCNN1BP51168 640 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 FOXL2P58012 376 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 ADAM8P78325 824 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 TRAF2Q12933 501 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 PLCL1Q15111 1095 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 C3AR1Q16581 482 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CDO1Q16878 200 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CCDC14Q49A88 953 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 AGAP7PQ5VUJ5 663 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 LRRC66Q68CR7 880 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 FAAH2Q6GMR7 532 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 ABRAXAS1Q6UWZ7 409 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 NCCRP1Q6ZVX7 275 aaPredicted RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 ENOSF1Q7L5Y1 443 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 RBM12BQ8IXT5 1001 aaKnown RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 NTAN1Q96AB6 310 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 C18orf8Q96DM3 657 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 AGAP4Q96P64 663 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 SMIM14Q96QK8 99 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 WDR24Q96S15 920 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CD180Q99467 661 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 RIOK2Q9BVS4 552 aaKnown RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 OSGEPL1Q9H4B0 414 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 ACTR5Q9H9F9 607 aaPredicted RBP8.03□□□□□ -1.12
XRN1-212ENST00000486211 KLC4Q9NSK0 619 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 ZNF358Q9NW07 568 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 TINAGQ9UJW2 476 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 BTRCQ9Y297 605 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 PPIL1Q9Y3C6 166 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 ATRQ13535 2644 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 CCDC88CQ9P219 2028 aa8.03□□□□□ -1.12
XRN1-212ENST00000486211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 A0A1W2PQ67 120 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 FAM170AA1A519 330 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 FADS2P1A8MWK0 482 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 C9J4A7 227 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 AGPSO00116 658 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 DDX3YO15523 660 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 SLC19A2O60779 497 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 UMODP07911 640 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 ZNF8P17098 575 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 USP8P40818 1118 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 ARL4DP49703 201 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 PAPOLAP51003 745 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 STC1P52823 247 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 APBA1Q02410 837 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 FOLH1Q04609 750 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 CEBPEQ15744 281 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 SEPT7Q16181 437 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 INAQ16352 499 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 COBLL1Q53SF7 1204 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 DNTTIP2Q5QJE6 756 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 PRAMEF13Q5VWM6 474 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 TRIM72Q6ZMU5 477 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 CD163Q86VB7 1156 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 Q8N3U1 123 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 OR2Y1Q8NGV0 311 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 OR1L3Q8NH93 324 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 DNAJB8Q8NHS0 232 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 CENPIQ92674 756 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 CELF6Q96J87 481 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 MAGEB10Q96LZ2 347 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 PPM1MQ96MI6 270 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 PSKH2Q96QS6 385 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 TSG101Q99816 390 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 DPH2Q9BQC3 489 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 CINPQ9BW66 212 aaPredicted RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 TLR10Q9BXR5 811 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 SLC39A8Q9C0K1 460 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 CARD9Q9H257 536 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 SLC6A20Q9NP91 592 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 ABI3Q9P2A4 366 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 ATXN10Q9UBB4 475 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 SEC14L3Q9UDX4 400 aa8.02□□□□□ -1.13
XRN1-212ENST00000486211 PTRH2Q9Y3E5 179 aaKnown RBP8.02□□□□□ -1.13
XRN1-212ENST00000486211 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
XRN1-212ENST00000486211 UBA6A0AVT1 1052 aaPredicted RBP8.01□□□□□ -1.13
XRN1-212ENST00000486211 OR5K3A6NET4 321 aa8.01□□□□□ -1.13
XRN1-212ENST00000486211 PDZK1P1A8MUH7 402 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms