RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 NRDCO43847 1150 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 MTX2O75431 263 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 PTMAP06454 111 aaKnown RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 LIPCP11150 499 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 RALBP11234 206 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 MSH3P20585 1137 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CA5AP35218 305 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ETV5P41161 510 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CD151P48509 253 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ZNF140P52738 457 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 GDF10P55107 478 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 RAB15P59190 212 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 RHDQ02161 417 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 VAC14Q08AM6 782 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CDH17Q12864 832 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CLN3Q13286 438 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CLCA4Q14CN2 919 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 SIX1Q15475 284 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 MAP9Q49MG5 647 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 SOWAHCQ53LP3 525 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 PHF19Q5T6S3 580 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 NKAIN2Q5VXU1 208 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CAPRIN2Q6IMN6 1127 aaKnown RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 FAM151BQ6UXP7 276 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ARHGEF18Q6ZSZ5 1173 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CARFQ8N187 725 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 NXPE1Q8N323 547 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 BMPERQ8N8U9 685 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 OR13C4Q8NGS5 318 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 GDAP1Q8TB36 358 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 KLHL6Q8WZ60 621 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 NCSTNQ92542 709 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 USP7Q93009 1102 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 RANBP9Q96S59 729 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CCNL2Q96S94 520 aaPredicted RBP6.87□□□□□ -1.31
VPS50-218ENST00000485994 COPS8Q99627 209 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 FAM118BQ9BPY3 351 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 CCM2Q9BSQ5 444 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 TLR10Q9BXR5 811 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ETNK1Q9HBU6 452 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ARFGAP3Q9NP61 516 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 OGFRQ9NZT2 677 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 ZNF148Q9UQR1 794 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 KCTD3Q9Y597 815 aa6.87□□□□□ -1.31
VPS50-218ENST00000485994 PIEZO2Q9H5I5 2752 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PCM1Q15154 2024 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ATMQ13315 3056 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PRAMEF33A0A0G2JMD5 474 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PMS2P1A4D2B8 440 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CFAP99D6REC4 459 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ERVH48-1M5A8F1 160 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 QSOX1O00391 747 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 CAPN5O15484 640 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 BUD23O43709 281 aaKnown RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 SNX2O60749 519 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PRAMEF10O60809 474 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 UBXN7O94888 489 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 AP2A2O94973 939 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PRAMEF1O95521 474 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CCL4P13236 92 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ITIH1P19827 911 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ITGALP20701 1170 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ADRA1DP25100 572 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 RPL10P27635 214 aaKnown RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 NDUFS1P28331 727 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CSF2RBP32927 897 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 HALP42357 657 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PRLHRP49683 370 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CTSCP53634 463 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CCZ1BP86790 482 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CCZ1P86791 482 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 CDK16Q00536 496 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PLOD1Q02809 727 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 ACVR1Q04771 509 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 RPA4Q13156 261 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 OLIG2Q13516 323 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 SEMA5AQ13591 1074 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ITIH4Q14624 930 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PTPRCAPQ14761 206 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 DCAF12Q5T6F0 453 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 LYPLAL1Q5VWZ2 237 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 KLHL35Q6PF15 583 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CXorf40BQ96DE9 158 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 SGF29Q96ES7 293 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ZDHHC12Q96GR4 267 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 C9orf72Q96LT7 481 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CCDC74BQ96LY2 380 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 FCRL3Q96P31 734 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 FCRL4Q96PJ5 515 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ALS2CR12Q96Q35 445 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 APOL2Q9BQE5 337 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 TRIT1Q9H3H1 467 aaKnown RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 OSGEPL1Q9H4B0 414 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms