RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 AHCYL2Q96HN2 611 aaKnown RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 TKTL2Q9H0I9 626 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ING2Q9H160 280 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ACTL8Q9H568 366 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ACSS2Q9NR19 701 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 PIGVQ9NUD9 493 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 ASNSD1Q9NWL6 643 aa6.53□□□□□ -1.36
SMC4-217ENST00000485867 TRNAU1APQ9NX07 287 aaKnown RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.53□□□□□ -1.36
SMC4-217ENST00000485867 TSPAN11A1L157 253 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 B2RBV5 119 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 C21orf140B9A014 251 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 LRRTM2O43300 516 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 CUTAO60888 179 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 HSF2BPO75031 334 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 RECQL5O94762 991 aaPredicted RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 KIAA0754O94854 1291 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 SNRPB2P08579 225 aaKnown RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 GARSP41250 739 aaKnown RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 ECI1P42126 302 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 FASLGP48023 281 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 PPM1FP49593 454 aaPredicted RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 CXCR3P49682 368 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 GEMIN4P57678 1058 aaKnown RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 RPS18P62269 152 aaKnown RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 RAD51Q06609 339 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 CDK18Q07002 472 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 PDCLQ13371 301 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 IL10RAQ13651 578 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 RABEP1Q15276 862 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 MEA1Q16626 185 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 DCAF17Q5H9S7 520 aaPredicted RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 BRMS1LQ5PSV4 323 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 LEKR1Q6ZMV7 388 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 DRC7Q8IY82 874 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 CISD2Q8N5K1 135 aaKnown RBP6.52□□□□□ -1.37
SMC4-217ENST00000485867 FDCSPQ8NFU4 85 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 SLC37A2Q8TED4 501 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 GDAP1L1Q96MZ0 367 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 RUFY1Q96T51 708 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 NUDT9Q9BW91 350 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 C1QTNF3Q9BXJ4 246 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 WDR26Q9H7D7 661 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 MFHAS1Q9Y4C4 1052 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 DOCK10Q96BY6 2186 aa6.52□□□□□ -1.37
SMC4-217ENST00000485867 CSPG4Q6UVK1 2322 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ABCA4P78363 2273 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 CCDC88CQ9P219 2028 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 GOLGA6L3A6NEY3 463 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 DDX3XO00571 662 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMC4-217ENST00000485867 INSIG1O15503 277 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 SUSD5O60279 629 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 DAB1O75553 588 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 TMCC1O94876 653 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NDUFA10O95299 355 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 PIGNO95427 931 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 IGSF6O95976 241 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ANKRD34CP0C6C1 535 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 EPB41P11171 864 aaKnown RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 MYCLP1P12525 358 aaPredicted RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 GM2AP17900 193 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ETFBP38117 255 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ADCY8P40145 1251 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ACTR1BP42025 376 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 GNPDA1P46926 289 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NDST2P52849 883 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ACTR1AP61163 376 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 FOXM1Q08050 763 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 RALGDSQ12967 914 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 LAMB3Q13751 1172 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 SF1Q15637 639 aaKnown RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 UGP2Q16851 508 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 PRSS53Q2L4Q9 553 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 CRB2Q5IJ48 1285 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 DENND5AQ6IQ26 1287 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ERAP2Q6P179 960 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 OLFML1Q6UWY5 402 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 CEP57L1Q8IYX8 460 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 PPM1KQ8N3J5 372 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 GUF1Q8N442 669 aaKnown RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 ST6GALNAC3Q8NDV1 305 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NCSTNQ92542 709 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 PAGE5Q96GU1 130 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 C1orf74Q96LT6 269 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NT5C1BQ96P26 610 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 CPXM1Q96SM3 734 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 NPY6RQ99463 290 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 SMAD5Q99717 465 aaKnown RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 BARD1Q99728 777 aaKnown RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 FRMD8Q9BZ67 464 aaPredicted RBP6.51□□□□□ -1.37
SMC4-217ENST00000485867 TRIM8Q9BZR9 551 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 ZYG11BQ9C0D3 744 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 TTYH3Q9C0H2 523 aa6.51□□□□□ -1.37
SMC4-217ENST00000485867 BRD8Q9H0E9 1235 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms