RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 CCDC70Q6NSX1 233 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 IYDQ6PHW0 289 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 DOK6Q6PKX4 331 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 UNQ6494/PRO21346Q6UXR6 183 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ZNF574Q6ZN55 896 aaPredicted RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 SPRED1Q7Z699 444 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 LINC00523Q86TU6 105 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ZNF761Q86XN6 746 aaPredicted RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SLITRK4Q8IW52 837 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 MPP5Q8N3R9 675 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ARL14Q8N4G2 192 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SLC25A41Q8N5S1 370 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GPR150Q8NGU9 434 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 MDM1Q8TC05 714 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 IFI44Q8TCB0 444 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 MAIP1Q8WWC4 291 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 CDKN2AIPNLQ96HQ2 116 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 OR2M4Q96R27 311 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SLC30A3Q99726 388 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 TBL1YQ9BQ87 522 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 FERMT1Q9BQL6 677 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 TIMM29Q9BSF4 260 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GSDMCQ9BYG8 508 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GPR63Q9BZJ6 419 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GSX2Q9BZM3 304 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 B3GNT4Q9C0J1 378 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SUDS3Q9H7L9 328 aaPredicted RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 CARS2Q9HA77 564 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 SARS2Q9NP81 518 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 OGFRQ9NZT2 677 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SEMA5BQ9P283 1151 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ACSL6Q9UKU0 697 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SNX12Q9UMY4 172 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 WDR37Q9Y2I8 494 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ENTPD2Q9Y5L3 495 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 PRSS21Q9Y6M0 314 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.63□□□□□ -1.51
CUX1-208ENST00000485792 GLYATL1P3A0A0U1RQE8 302 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 C17orf113A0A1B0GUU1 675 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TRABD2BA6NFA1 517 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 OR5K4A6NMS3 321 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 C2orf81A6NN90 581 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CDRT15L2A8MXV6 281 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 NDUFB5O43674 189 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A9O60656 530 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 BANF1O75531 89 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 KRT37O76014 449 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 SRP72O76094 671 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 SLC25A14O95258 325 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 ECEL1O95672 775 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CRTAMO95727 393 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 MT-CO3P00414 261 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TPBGLP0DKB5 382 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 F3P13726 295 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CTSEP14091 401 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF7P17097 686 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 TPH1P17752 444 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A6P19224 532 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TPSB2P20231 275 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A1P22309 533 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A4P22310 534 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CD1CP29017 333 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 FOXN2P32314 431 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A3P35503 534 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 UGT1A5P35504 534 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 HADHAP40939 763 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 GNPDA1P46926 289 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 LSSP48449 732 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CRADDP78560 199 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CDH17Q12864 832 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ILF3Q12906 894 aaKnown RBP eCLIP5.62□□□□□ -1.51
CUX1-208ENST00000485792 TARDBPQ13148 414 aaKnown RBP eCLIP5.62□□□□□ -1.51
CUX1-208ENST00000485792 SNX1Q13596 522 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ITGA9Q13797 1035 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 PRPSAP1Q14558 356 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 KCNJ11Q14654 390 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TPSAB1Q15661 275 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 BCL7AQ4VC05 210 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CCDC38Q502W7 563 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF569Q5MCW4 686 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 LDLRAP1Q5SW96 308 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CCDC181Q5TID7 509 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ZNF468Q5VIY5 522 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 METRNLQ641Q3 311 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 DUS1LQ6P1R4 473 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 FAM151BQ6UXP7 276 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 ARHGEF18Q6ZSZ5 1173 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 MARK2Q7KZI7 788 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 RD3Q7Z3Z2 195 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 GLT6D1Q7Z4J2 308 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 SNX20Q7Z614 316 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TAF8Q7Z7C8 310 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CAND1Q86VP6 1230 aaKnown RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 GALNT13Q8IUC8 556 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 CREG2Q8IUH2 290 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 PHYKPLQ8IUZ5 450 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 TMEM151BQ8IW70 566 aa5.62□□□□□ -1.51
CUX1-208ENST00000485792 BEND7Q8N7W2 519 aaPredicted RBP5.62□□□□□ -1.51
CUX1-208ENST00000485792 RASGEF1AQ8N9B8 481 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms