RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TPSB2P20231 275 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 MGAT1P26572 445 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 EIF2S3P41091 472 aaKnown RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 NSG1P42857 185 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 PAFAH1B1P43034 410 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 ABCG1P45844 678 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 PRLHRP49683 370 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 CRADDP78560 199 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 TPSAB1Q15661 275 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 CYP1B1Q16678 543 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 TMEM164Q5U3C3 297 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 CASC4Q6P4E1 433 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 LRRC8BQ6P9F7 803 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 WDR74Q6RFH5 385 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 ZNF574Q6ZN55 896 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 MICALCLQ6ZW33 695 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 FAM129CQ86XR2 697 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 PIANPQ8IYJ0 282 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 AGBL5Q8NDL9 886 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 SNIP1Q8TAD8 396 aaKnown RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 KCNE4Q8WWG9 221 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 PRR11Q96HE9 360 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 LINC00615Q96LM1 132 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-205ENST00000485746 CHRAC1Q9NRG0 131 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 TMEM9Q9P0T7 183 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 HEBP2Q9Y5Z4 205 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 COLEC10Q9Y6Z7 277 aa12.26□□□□□ -0.45
PTCD1-205ENST00000485746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-205ENST00000485746 PRAMEF33A0A0G2JMD5 474 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 C17orf113A0A1B0GUU1 675 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 A0A1W2PNU3 283 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-205ENST00000485746 TCRBV7S3A2A0A539 114 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 EFCAB7A8K855 629 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 GOLGA8MH3BSY2 632 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 HGSO14964 777 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-205ENST00000485746 RASSF9O75901 435 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 FTH1P02794 183 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 SLC5A2P31639 672 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 FOXN2P32314 431 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 CSF2RBP32927 897 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 FNTAP49354 379 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 CFHR1Q03591 330 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 GPR18Q14330 331 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 ITIH4Q14624 930 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 C16orf72Q14CZ0 275 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 BRD3Q15059 726 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 ARMC6Q6NXE6 501 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 IRGCQ6NXR0 463 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 KLHL35Q6PF15 583 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 IGF2-ASQ6U949 168 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 CERS6Q6ZMG9 384 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 CLDN19Q8N6F1 224 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 OR13J1Q8NGT2 312 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 JPH3Q8WXH2 748 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-205ENST00000485746 USP7Q93009 1102 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 ZNF778Q96MU6 729 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 TGM7Q96PF1 710 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 FERD3LQ96RJ6 166 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 INSM2Q96T92 566 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-205ENST00000485746 TSSK1BQ9BXA7 367 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 SLC40A1Q9NP59 571 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 ASCL3Q9NQ33 180 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 CATSPERZQ9NTU4 200 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 SYBUQ9NX95 663 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 ASIC3Q9UHC3 531 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 SAR1BQ9Y6B6 198 aa12.25□□□□□ -0.45
PTCD1-205ENST00000485746 IGLV3-16A0A075B6K0 115 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 A0A087WV48 116 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 PRR19A6NJB7 356 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 PFDN6O15212 129 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 KLK10O43240 276 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 SGTAO43765 313 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 NDUFS3O75489 264 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 GSTM1P09488 218 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 THRAP10827 490 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 MTHFD1P11586 935 aaKnown RBP12.24□□□□□ -0.45
PTCD1-205ENST00000485746 CCL4P13236 92 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 PAMP19021 973 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 PSMA3P25788 255 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 NDUFS1P28331 727 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 NMBRP28336 390 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 GSTM4Q03013 218 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 GOLGA4Q13439 2230 aaKnown RBP12.24□□□□□ -0.45
PTCD1-205ENST00000485746 KCNJ11Q14654 390 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 COL28A1Q2UY09 1125 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 SYTL3Q4VX76 610 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 CES3Q6UWW8 571 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 SDCCAG8Q86SQ7 713 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-205ENST00000485746 LILRA3Q8N6C8 439 aaPredicted RBP12.24□□□□□ -0.45
PTCD1-205ENST00000485746 ELMO1Q92556 727 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 PEX13Q92968 403 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 ZDHHC12Q96GR4 267 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 COG4Q9H9E3 785 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 SLC39A1Q9NY26 324 aa12.24□□□□□ -0.45
PTCD1-205ENST00000485746 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms