RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 SNAI1O95863 264 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 G6PDP11413 515 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 ACVR1Q04771 509 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 CDK5R2Q13319 367 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 SF3B4Q15427 424 aaKnown RBP eCLIP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 RBBP7Q16576 425 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 HIST2H2ACQ16777 129 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 BRMS1LQ5PSV4 323 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 MARC1Q5VT66 337 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 NECAB2Q7Z6G3 386 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 DYNC2LI1Q8TCX1 351 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 PAAF1Q9BRP4 392 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 LIMD1Q9UGP4 676 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 CDH9Q9ULB4 789 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 TRIP12Q14669 1992 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 SMIM10L2AP0DMW4 78 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 SMIM10L2BP0DMW5 78 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 TGFBR1P36897 503 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 NCS1P62166 190 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 CARTPTQ16568 116 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 ATP6AP1LQ52LC2 224 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 LAIR1Q6GTX8 287 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 TXNDC11Q6PKC3 985 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 MOB2Q70IA6 237 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 GPR150Q8NGU9 434 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 RHBDF1Q96CC6 855 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 TSPAN18Q96SJ8 248 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 CTRCQ99895 268 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 RBM4BQ9BQ04 359 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 RBM4Q9BWF3 364 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 DERL2Q9GZP9 239 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 POPDC3Q9HBV1 291 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 ADGRE2Q9UHX3 823 aa19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 TMEFF2Q9UIK5 374 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-216ENST00000484134 LOC285095A0A1B0GVY8 99 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 TTC34A8MYJ7 566 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 SLC22A1O15245 554 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 DNAJB5O75953 348 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 RHOBTB1O94844 696 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 FMO4P31512 558 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 TOP3AQ13472 1001 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 MRNIPQ6NTE8 343 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 LINC00299Q6ZSB3 139 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 FAM126BQ8IXS8 530 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 OR52B6Q8NGF0 335 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 PSMG2Q969U7 264 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 EFHD2Q96C19 240 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 YIPF6Q96EC8 236 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 UGT2B28Q9BY64 529 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 GORASP2Q9H8Y8 452 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 ACTR8Q9H981 624 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 SP110Q9HB58 689 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 SLCO3A1Q9UIG8 710 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 INTS6Q9UL03 887 aaKnown RBP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 OTOFQ9HC10 1997 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 UBA6A0AVT1 1052 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 RRN3P2A6NIE6 340 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 GNGT2O14610 69 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 PRKD3O94806 890 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 CHEK2O96017 543 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 PFKLP17858 780 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 HTR6P50406 440 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 HK3P52790 923 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 RAPSNQ13702 412 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 TMEM86AQ8N2M4 240 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 OR10A6Q8NH74 314 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 MCOLN3Q8TDD5 553 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 SLC47A1Q96FL8 570 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 ZNF300Q96RE9 604 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 RHNO1Q9BSD3 238 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 C17orf80Q9BSJ5 609 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 MIOSQ9NXC5 875 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 ERVK-11Q9UQG0 969 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 PCDHGB1Q9Y5G3 927 aa19.48■□□□□ 0.71
RPUSD3-216ENST00000484134 ARNTLO00327 626 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 PRMT5O14744 637 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 ANKRD28O15084 1053 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 MITFO75030 526 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 HOXD8P13378 290 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 FMO3P31513 532 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 DCTP40126 519 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 STC1P52823 247 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 SLC13A2Q13183 592 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 PWP1Q13610 501 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 PCBP1Q15365 356 aaKnown RBP eCLIP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 DGUOKQ16854 277 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 PIK3R6Q5UE93 754 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 CCDC80Q76M96 950 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 DCP2Q8IU60 420 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 OR2T12Q8NG77 320 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 OR4L1Q8NH43 312 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 TADA1Q96BN2 335 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 NECTIN3Q9NQS3 549 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 CATSPERZQ9NTU4 200 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 EIF2B4Q9UI10 523 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 PCDHGA10Q9Y5H3 936 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 U3KQV3 271 aa19.47■□□□□ 0.71
RPUSD3-216ENST00000484134 SMIM35A0A1B0GVV1 85 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms