RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 KMT5CQ86Y97 462 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 TMEM126BQ8IUX1 230 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
UBR4-213ENST00000483922 OR1L3Q8NH93 324 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 ADGRE3Q9BY15 652 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 NLNQ9BYT8 704 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 MAP10Q9P2G4 905 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 IP6K2Q9UHH9 426 aa12.57□□□□□ -0.4
UBR4-213ENST00000483922 SPTBP11277 2137 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 CROCCQ5TZA2 2017 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 TLCD2A6NGC4 264 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 GAPDHSO14556 408 aaPredicted RBP12.56□□□□□ -0.4
UBR4-213ENST00000483922 VAV2P52735 878 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 FOXL2P58012 376 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 CDK18Q07002 472 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 PPIDQ08752 370 aaKnown RBP12.56□□□□□ -0.4
UBR4-213ENST00000483922 ATP1A4Q13733 1029 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 PCSK7Q16549 785 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
UBR4-213ENST00000483922 ZNF385CQ66K41 422 aaPredicted RBP12.56□□□□□ -0.4
UBR4-213ENST00000483922 TMEM220Q6QAJ8 160 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 TRAPPC5Q8IUR0 188 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 PLD5Q8N7P1 536 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 BEND7Q8N7W2 519 aaPredicted RBP12.56□□□□□ -0.4
UBR4-213ENST00000483922 KCTD6Q8NC69 237 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 ANKRD20A12PQ8NF67 263 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 RAPGEF5Q92565 580 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 TRIM11Q96F44 468 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 AGAP3Q96P47 875 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 RNF157Q96PX1 679 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 ZNF670Q9BS34 389 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 GPR63Q9BZJ6 419 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 CELSR1Q9NYQ6 3014 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 ADGRG4Q8IZF6 3080 aa12.56□□□□□ -0.4
UBR4-213ENST00000483922 A0A087X0T9 212 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 UBA6A0AVT1 1052 aaPredicted RBP12.55□□□□□ -0.4
UBR4-213ENST00000483922 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 SLC9B1P1A6NJY1 282 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 KLF7O75840 302 aaPredicted RBP12.55□□□□□ -0.4
UBR4-213ENST00000483922 ZBTB11O95625 1053 aaPredicted RBP12.55□□□□□ -0.4
UBR4-213ENST00000483922 FAM228BP0C875 321 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 MTHFD1P11586 935 aaKnown RBP12.55□□□□□ -0.4
UBR4-213ENST00000483922 GJC1P36383 396 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 PDE1BQ01064 536 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 PTCHD3Q3KNS1 767 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 METRNLQ641Q3 311 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 NPNTQ6UXI9 565 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 MED25Q71SY5 747 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 AMZ2Q86W34 360 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 LILRA3Q8N6C8 439 aaPredicted RBP12.55□□□□□ -0.4
UBR4-213ENST00000483922 CD180Q99467 661 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 TLR10Q9BXR5 811 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 GPR83Q9NYM4 423 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 CHMP5Q9NZZ3 219 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 SLC24A2Q9UI40 661 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 NENFQ9UMX5 172 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 SNX7Q9UNH6 387 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 SRPK3Q9UPE1 567 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
UBR4-213ENST00000483922 ZFHX3Q15911 3703 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 TACC2O95359 2948 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 C3orf70A6NLC5 250 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 OR2AG2A6NM03 316 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 F5H423 210 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 SGTAO43765 313 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 KCNJ13O60928 360 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 KDELR1P24390 212 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 CD68P34810 354 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 HALP42357 657 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 SSR1P43307 286 aaKnown RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 PDK2Q15119 407 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 CYB5D1Q6P9G0 228 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 NT5DC3Q86UY8 548 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 TMEM102Q8N9M5 508 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 C5orf34Q96MH7 638 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 SLC29A3Q9BZD2 475 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 WWP1Q9H0M0 922 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 ZNF552Q9H707 407 aaPredicted RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 RAD18Q9NS91 495 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 IMP3Q9NV31 184 aaKnown RBP12.54□□□□□ -0.4
UBR4-213ENST00000483922 ANO10Q9NW15 660 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 UBP1Q9NZI7 540 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 IL17CQ9P0M4 197 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 CSAG2Q9Y5P2 127 aa12.54□□□□□ -0.4
UBR4-213ENST00000483922 DCHS2Q6V1P9 2916 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 LOC285095A0A1B0GVY8 99 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 ANKUB1A6NFN9 424 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 H3BMH7 237 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 MYO1FO00160 1098 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 HCRTR1O43613 425 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 BUD23O43709 281 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms