RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CD151P48509 253 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 SLC14A1Q13336 389 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 ZNF549Q6P9A3 640 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 KIAA0408Q6ZU52 694 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 LRRC6Q86X45 466 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 NAXDQ8IW45 347 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 RHBDD1Q8TEB9 315 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 LINC00615Q96LM1 132 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-224ENST00000483359 TXNDC16Q9P2K2 825 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 PCDHB1Q9Y5F3 818 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 PCDHGB2Q9Y5G2 931 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 CSNK1G3Q9Y6M4 447 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 TRBV23OR9-2A0A075B6M9 112 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 MGAT4DA6NG13 374 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 E5RI56 91 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 SIGLEC6O43699 453 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 ESR1P03372 595 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 ALPPL2P10696 532 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 PKMP14618 531 aaKnown RBP17.51■□□□□ 0.39
CPNE1-224ENST00000483359 CHRM3P20309 590 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 PREPP48147 710 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 SYTL3Q4VX76 610 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 RBM20Q5T481 1227 aaKnown RBP17.51■□□□□ 0.39
CPNE1-224ENST00000483359 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 OR4C6Q8NH72 309 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 UBLCP1Q8WVY7 318 aaPredicted RBP17.51■□□□□ 0.39
CPNE1-224ENST00000483359 SCG3Q8WXD2 468 aaKnown RBP17.51■□□□□ 0.39
CPNE1-224ENST00000483359 TXLNGYQ9BZA5 131 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 RABGEF1Q9UJ41 708 aa17.51■□□□□ 0.39
CPNE1-224ENST00000483359 RIPK2O43353 540 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 FAM155BO75949 473 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 MCM3P25205 808 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 CCR7P32248 378 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 ADARP55265 1226 aaKnown RBP17.5■□□□□ 0.39
CPNE1-224ENST00000483359 C6orf132Q5T0Z8 1188 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 XKR5Q6UX68 686 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
CPNE1-224ENST00000483359 SLC26A11Q86WA9 606 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 HM13Q8TCT9 377 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 ZDHHC1Q8WTX9 485 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 COG4Q9H9E3 785 aa17.5■□□□□ 0.39
CPNE1-224ENST00000483359 TSR3Q9UJK0 312 aaKnown RBP17.5■□□□□ 0.39
CPNE1-224ENST00000483359 DNMT3AQ9Y6K1 912 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-224ENST00000483359 SAT1P21673 171 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 IDSP22304 550 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 PGGT1BP53609 377 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 HSPA14Q0VDF9 509 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 UAP1Q16222 522 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 INAVAQ3KP66 663 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 DBX2Q6ZNG2 339 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 CYS1Q717R9 158 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 KYQ8NBH2 561 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.49■□□□□ 0.393e-13■■■■■ 108.9
CPNE1-224ENST00000483359 PANX3Q96QZ0 392 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 DUSP23Q9BVJ7 150 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 TSSK1BQ9BXA7 367 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 NSMCE4AQ9NXX6 385 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 GALPQ9UBC7 116 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 WDR37Q9Y2I8 494 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 ARHGEF17Q96PE2 2063 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 F8W8V4 182 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 TPP1O14773 563 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 CLCNKAP51800 687 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 LIMK1P53667 647 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 DMPKQ09013 629 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 ZCCHC8Q6NZY4 707 aaKnown RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 ZNF449Q6P9G9 518 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 NAGSQ8N159 534 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 SPDYE1Q8NFV5 336 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 APOLD1Q96LR9 279 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 CYTH2Q99418 400 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 AARSD1Q9BTE6 412 aaKnown RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 SCHIP1Q9P0W5 487 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 CDV3Q9UKY7 258 aaKnown RBP17.49■□□□□ 0.39
CPNE1-224ENST00000483359 PCOLCE2Q9UKZ9 415 aa17.49■□□□□ 0.39
CPNE1-224ENST00000483359 A0A087WUV0 522 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-224ENST00000483359 PRR19A6NJB7 356 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 OR52A4PA6NMU1 304 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 PDHA2P29803 388 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 MAZP56270 477 aaKnown RBP17.48■□□□□ 0.39
CPNE1-224ENST00000483359 SLC29A2Q14542 456 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 ZNF658BQ4V348 819 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-224ENST00000483359 LVRNQ6Q4G3 990 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 GALNT7Q86SF2 657 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 PIM3Q86V86 326 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 ZC3HC1Q86WB0 502 aaKnown RBP17.48■□□□□ 0.39
CPNE1-224ENST00000483359 SLC35F3Q8IY50 421 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 SDR16C5Q8N3Y7 309 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 SIDT2Q8NBJ9 832 aaKnown RBP17.48■□□□□ 0.39
CPNE1-224ENST00000483359 ACVR1CQ8NER5 493 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 CPNE1Q99829 537 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 WWP1Q9H0M0 922 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 EPB41L4BQ9H329 900 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 RAB21Q9UL25 225 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 MED16Q9Y2X0 877 aa17.48■□□□□ 0.39
CPNE1-224ENST00000483359 CFAP20Q9Y6A4 193 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms