RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CYP20A1Q6UW02 462 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CDKN2AIPNLQ96HQ2 116 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 PARVBQ9HBI1 364 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 INIPQ9NRY2 104 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 EIF3LQ9Y262 564 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 ITGB1P05556 798 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GSTT2P0CG29 244 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GSTT2BP0CG30 244 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 DGKEP52429 567 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CRY1Q16526 586 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 DGUOKQ16854 277 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 PM20D1Q6GTS8 502 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ZNF598Q86UK7 904 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CNTN4Q8IWV2 1026 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 SPARTQ8N0X7 666 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 TMEM199Q8N511 208 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 OR10T2Q8NGX3 314 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 NDNFQ8TB73 568 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ZHX1-C8orf76Q96EF9 292 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 MFSD1Q9H3U5 465 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 MARCH2Q9P0N8 246 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GMPPBQ9Y5P6 360 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 PSMD11O00231 422 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ACOX3O15254 700 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 SERPINB7O75635 380 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 SERPINA1P01009 418 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CD52P31358 61 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 HPCAL1P37235 193 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 DMC1Q14565 340 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 SPANXN4Q5MJ08 99 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GPR142Q7Z601 462 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 DSG4Q86SJ6 1040 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 KRTCAP2Q8N6L1 136 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CEP19Q96LK0 163 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 FAM124BQ9H5Z6 455 aaPredicted RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ERVK-18Q9QC07 812 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 GNPTGQ9UJJ9 305 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 PCDHGA11Q9Y5H2 935 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 A0A0D9SEW6 157 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 UROSP10746 265 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 KCNE1P15382 129 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 DCKP27707 260 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 CA8P35219 290 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 TGFBR1P36897 503 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 MLLT10P55197 1068 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 MLLT6P55198 1093 aaPredicted RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 ERVK-8P63133 956 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 COLEC12Q5KU26 742 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 NIPAL1Q6NVV3 410 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 FBXL22Q6P050 247 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 CLDN19Q8N6F1 224 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 Q8N9G6 341 aaPredicted RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 MCFD2Q8NI22 146 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 RPL3LQ92901 407 aaKnown RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 PPP1R14BQ96C90 147 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 ASB1Q9Y576 335 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 ZFC3H1O60293 1989 aaKnown RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 PHIPQ8WWQ0 1821 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 FZD9O00144 591 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 PGLSO95336 258 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 MLYCDO95822 493 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 CDH1P12830 882 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 HTR1BP28222 390 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 AXLP30530 894 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 HOXD12P35452 270 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 RFTN2Q52LD8 501 aaPredicted RBP12.54□□□□□ -0.4
VPS52-218ENST00000482399 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 SMYD5Q6GMV2 418 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 SLC22A15Q8IZD6 547 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 PPP1R2P1Q96PQ5 205 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 VAPAQ9P0L0 249 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 GPR45Q9Y5Y3 372 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 LOC100130705A0A1B0GUX0 176 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 ELOVL7A1L3X0 281 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 IGFBP5P24593 272 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 IL12AP29459 219 aa12.54□□□□□ -0.4
VPS52-218ENST00000482399 FAM189BP81408 668 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms