RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PSMB4P28070 264 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 ARL4DP49703 201 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 NAP1L1P55209 391 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 OTUD4Q01804 1114 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 TLE1Q04724 770 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 OLIG2Q13516 323 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 SKIDA1Q1XH10 827 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 DUS1LQ6P1R4 473 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 KLHL35Q6PF15 583 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 PPP1R3BQ86XI6 285 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 CDKL3Q8IVW4 592 aaPredicted RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 CCDC170Q8IYT3 715 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 SIDT2Q8NBJ9 832 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 OR4K2Q8NGD2 314 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 ACTL9Q8TC94 416 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 APOBEC4Q8WW27 367 aaKnown RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 KLHL6Q8WZ60 621 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 FAM118BQ9BPY3 351 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 GORASP1Q9BQQ3 440 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 WWP1Q9H0M0 922 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 ASB8Q9H765 288 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 PDE7BQ9NP56 450 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 SMOXQ9NWM0 555 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 EPHA6Q9UF33 1036 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 FKBPLQ9UIM3 349 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 KCTD3Q9Y597 815 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 PCDHB3Q9Y5E6 796 aa14.92□□□□□ -0.02
LIMS3-203ENST00000480744 DNMT3AQ9Y6K1 912 aaPredicted RBP14.92□□□□□ -0.02
LIMS3-203ENST00000480744 IGHV5-51A0A0C4DH38 117 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 CCNYL3P0C7X3 344 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 MTHFD1P11586 935 aaKnown RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 FGF5P12034 268 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 ZNF75DP51815 510 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 EIF3EP60228 445 aaKnown RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 COPS2P61201 443 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 TMPRSS15P98073 1019 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 TUBB3Q13509 450 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 SEPT6Q14141 434 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 ERV3-1Q14264 604 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 PRPSAP1Q14558 356 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 TAF1AQ15573 450 aaPredicted RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 CYB5D1Q6P9G0 228 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 DARS2Q6PI48 645 aaKnown RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 UBXN4Q92575 508 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 ZNF514Q96K75 400 aaPredicted RBP14.91□□□□□ -0.02
LIMS3-203ENST00000480744 C12orf66Q96MD2 445 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 RAB33BQ9H082 229 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 CRLS1Q9UJA2 301 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 RARRES3Q9UL19 164 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 PIKFYVEQ9Y2I7 2098 aa14.91□□□□□ -0.02
LIMS3-203ENST00000480744 MGAT4DA6NG13 374 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 SOWAHDA6NJG2 315 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 KCNN4O15554 427 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 PJA2O43164 708 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 SRP72O76094 671 aaKnown RBP14.9□□□□□ -0.02
LIMS3-203ENST00000480744 TIAF1O95411 115 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 POLBP06746 335 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 SLC35G4P0C7Q5 338 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 RBP3P10745 1247 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 CTNNA1P35221 906 aaKnown RBP14.9□□□□□ -0.02
LIMS3-203ENST00000480744 ANKRD20A2Q5SQ80 823 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 ANKRD20A1Q5TYW2 823 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 ANKRD20A3Q5VUR7 823 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 METRNLQ641Q3 311 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 ARMC6Q6NXE6 501 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 CERS6Q6ZMG9 384 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 OR13C4Q8NGS5 318 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 CCDC110Q8TBZ0 833 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 DCUN1D1Q96GG9 259 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 INSM2Q96T92 566 aaPredicted RBP14.9□□□□□ -0.02
LIMS3-203ENST00000480744 MAP3K3Q99759 626 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 OSBPL8Q9BZF1 889 aa14.9□□□□□ -0.02
LIMS3-203ENST00000480744 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
LIMS3-203ENST00000480744 UBA6A0AVT1 1052 aaPredicted RBP14.89□□□□□ -0.03
LIMS3-203ENST00000480744 CDC14CA4D256 554 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 RCCD1A6NED2 376 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 OR5K3A6NET4 321 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 C5orf60A6NFR6 353 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 ARHGAP6O43182 974 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 IPO7O95373 1038 aaKnown RBP14.89□□□□□ -0.03
LIMS3-203ENST00000480744 CRTAMO95727 393 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 MT-ND3P03897 115 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 EBLN1P0CF75 366 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 FOLR1P15328 257 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 ADRA1AP35348 466 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 CETN2P41208 172 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 ARCN1P48444 511 aaKnown RBP14.89□□□□□ -0.03
LIMS3-203ENST00000480744 DNASE1L3Q13609 305 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 KRT33BQ14525 404 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 GSE1Q14687 1217 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 AADACL2Q6P093 401 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 RANBP10Q6VN20 620 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 OOSP2Q86WS3 158 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
LIMS3-203ENST00000480744 OR2L2Q8NH16 312 aa14.89□□□□□ -0.03
LIMS3-203ENST00000480744 CT55Q8WUE5 264 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms