RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ABRAXAS1Q6UWZ7 409 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 USP45Q70EL2 814 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 SIMC1Q8NDZ2 872 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
USP11-208ENST00000480104 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 CARD9Q9H257 536 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 ARFGAP3Q9NP61 516 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 PLCB1Q9NQ66 1216 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 ATXN10Q9UBB4 475 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
USP11-208ENST00000480104 TRPS1Q9UHF7 1281 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 CDC23Q9UJX2 597 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
USP11-208ENST00000480104 FADS2P1A8MWK0 482 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 E7EQ34 232 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 FAM227AF5H4B4 570 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 SOCS5O75159 536 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 ATE1O95260 518 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 HBQ1P09105 142 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 PREPP48147 710 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 KPNA2P52292 529 aaKnown RBP11.51□□□□□ -0.57
USP11-208ENST00000480104 CDO1Q16878 200 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 MRPL14Q6P1L8 145 aaKnown RBP11.51□□□□□ -0.57
USP11-208ENST00000480104 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
USP11-208ENST00000480104 NLRP8Q86W28 1048 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 UMODL1-AS1Q8N2C9 162 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 PYROXD2Q8N2H3 581 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 GPR137Q96N19 417 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP11-208ENST00000480104 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
USP11-208ENST00000480104 OR2AG1Q9H205 316 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 SAMSN1Q9NSI8 373 aaKnown RBP11.51□□□□□ -0.57
USP11-208ENST00000480104 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 IL17CQ9P0M4 197 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 HS3ST3B1Q9Y662 390 aa11.51□□□□□ -0.57
USP11-208ENST00000480104 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 A0A1W2PQ67 120 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 BECN2A8MW95 431 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 GOLGA8SH3BPF8 625 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 SMAD7O15105 426 aaKnown RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 PMM2O15305 246 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 KCNAB3O43448 404 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CRLF1O75462 422 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 RAF1P04049 648 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 TPOP07202 933 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CD63P08962 238 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 STC1P52823 247 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 PTSQ03393 145 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CACNG1Q06432 222 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 NSUN2Q08J23 767 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP11-208ENST00000480104 TRAF2Q12933 501 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 ZNF648Q5T619 568 aaPredicted RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 AGAP9Q5VTM2 703 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 HMBOX1Q6NT76 420 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 KIRREL2Q6UWL6 708 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CDC20BQ86Y33 519 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 DOLPP1Q86YN1 238 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 ZZZ3Q8IYH5 903 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CARFQ8N187 725 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 LILRB4Q8NHJ6 448 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 TEKT4Q8WW24 435 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 KCNJ16Q9NPI9 418 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 FAM207AQ9NSI2 230 aaPredicted RBP11.5□□□□□ -0.57
USP11-208ENST00000480104 SERTAD3Q9UJW9 196 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 WDR37Q9Y2I8 494 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 ANKRD12Q6UB98 2062 aa11.5□□□□□ -0.57
USP11-208ENST00000480104 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 MSL3P1P0C860 447 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 ABOP16442 354 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 ZNF7P17097 686 aaPredicted RBP11.49□□□□□ -0.57
USP11-208ENST00000480104 SOX11P35716 441 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 USP8P40818 1118 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 LMAN1P49257 510 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 CTSCP53634 463 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 DCDP81605 110 aaKnown RBP11.49□□□□□ -0.57
USP11-208ENST00000480104 KEAP1Q14145 624 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 RESP18Q5W5W9 173 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 WASH2PQ6VEQ5 465 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 CEP128Q6ZU80 1094 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 OOSP2Q86WS3 158 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
USP11-208ENST00000480104 EMC1Q8N766 993 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 ARMC2Q8NEN0 867 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 GOT1L1Q8NHS2 421 aaPredicted RBP11.49□□□□□ -0.57
USP11-208ENST00000480104 HAS2Q92819 552 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 WDR24Q96S15 920 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 RNF32Q9H0A6 362 aa11.49□□□□□ -0.57
USP11-208ENST00000480104 UPF2Q9HAU5 1272 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms