RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ESR1P03372 595 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 CEACAM5P06731 702 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 CELA2BP08218 269 aaPredicted RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 PIRTP0C851 137 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 RALBP11234 206 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 MC4RP32245 332 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 LEPRP48357 1165 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 ARSDP51689 593 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 HK3P52790 923 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 THOP1P52888 689 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 PLTPP55058 493 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 TMPRSS3P57727 454 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 SESN2P58004 480 aaPredicted RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 CXADRP78310 365 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 PRAMEP78395 509 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ZFP36L1Q07352 338 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 VAC14Q08AM6 782 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 C1orf61Q13536 156 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 NR0B2Q15466 257 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 CHRNA6Q15825 494 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 PRRT3Q5FWE3 981 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 GPRC6AQ5T6X5 926 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 EMBQ6PCB8 327 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 RBM44Q6ZP01 1051 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 TRMT10CQ7L0Y3 403 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 KDELC2Q7Z4H8 507 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 C17orf82Q86X59 251 aaPredicted RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 CILP2Q8IUL8 1156 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 PELI3Q8N2H9 469 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 MREGQ8N565 214 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.77□□□□□ -1.01
DDX56-211ENST00000479602 AVL9Q8NBF6 648 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 PLA2G15Q8NCC3 412 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 GPR156Q8NFN8 814 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 CERS2Q96G23 380 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 ZNF778Q96MU6 729 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 COPS8Q99627 209 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ABCG4Q9H172 646 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ANKZF1Q9H8Y5 726 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 EPB41L5Q9HCM4 733 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 THSD1Q9NS62 852 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ZC3H7BQ9UGR2 993 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 PADI4Q9UM07 663 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 COQ6Q9Y2Z9 468 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 COL12A1Q99715 3063 aa8.77□□□□□ -1.01
DDX56-211ENST00000479602 ZFC3H1O60293 1989 aaKnown RBP8.77□□□□□ -1.01
DDX56-211ENST00000479602 RELNP78509 3460 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PRSS38A1L453 326 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 CCDC162PA2VCL2 907 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 EIF4E1BA6NMX2 242 aaKnown RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 F5H423 210 aaPredicted RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 AVILO75366 819 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PNLIPP16233 465 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 TPH1P17752 444 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 NMBRP28336 390 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ATP5DP30049 168 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 STX2P32856 288 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ELK3P41970 407 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 MAGEA4P43358 317 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 POLD2P49005 469 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PPARDQ03181 441 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 RPA4Q13156 261 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 CLN3Q13286 438 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 GBX1Q14549 363 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PTPRRQ15256 657 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ALG11Q2TAA5 492 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PYCR3Q53H96 274 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 AGAP9Q5VTM2 703 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 NEPROQ6NW34 567 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 UNC5AQ6ZN44 842 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 MARK2Q7KZI7 788 aaKnown RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 CCDC91Q7Z6B0 441 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 C11orf96Q7Z7L8 435 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ADGRG6Q86SQ4 1221 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ZNF605Q86T29 641 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ARL10Q8N8L6 244 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 C2CD4AQ8NCU7 369 aaPredicted RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 WDR36Q8NI36 951 aaKnown RBP8.76□□□□□ -1.01
DDX56-211ENST00000479602 GPBAR1Q8TDU6 330 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 PYROXD1Q8WU10 500 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 KCNE4Q8WWG9 221 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 LPGAT1Q92604 370 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 NAT6Q93015 286 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 HDAC10Q969S8 669 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 AGAP2Q99490 1192 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 CCDC3Q9BQI4 270 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 SPATA16Q9BXB7 569 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 P2RY12Q9H244 342 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ACSS3Q9H6R3 686 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 ASB8Q9H765 288 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 VPS37BQ9H9H4 285 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 FGF22Q9HCT0 170 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 CATSPERZQ9NTU4 200 aa8.76□□□□□ -1.01
DDX56-211ENST00000479602 EVA1BQ9NVM1 165 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms