RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PPP6R3Q5H9R7 873 aaPredicted RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 RARS2Q5T160 578 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TTC27Q6P3X3 843 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 KLHL35Q6PF15 583 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 CLEC4GQ6UXB4 293 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 IZUMO2Q6UXV1 221 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 LDHAL6AQ6ZMR3 332 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SLC51BQ86UW2 128 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TRABD2AQ86V40 505 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 HEATR4Q86WZ0 1026 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 MMAAQ8IVH4 418 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SLC44A2Q8IWA5 706 aaPredicted RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PM20D2Q8IYS1 436 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 MARVELD2Q8N4S9 558 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 FAM133AQ8N9E0 248 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 NCOA7Q8NI08 942 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 RAB3IL1Q8TBN0 382 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 STT3BQ8TCJ2 826 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 GIPC3Q8TF64 312 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SCFD2Q8WU76 684 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PRPF31Q8WWY3 499 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 CPT1BQ92523 772 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SDCCAG3Q96C92 435 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 ERP27Q96DN0 273 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 COG3Q96JB2 828 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 CNDP2Q96KP4 475 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PRICKLE1Q96MT3 831 aaPredicted RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 C7orf26Q96N11 449 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 CTRCQ99895 268 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PAAF1Q9BRP4 392 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TDRD1Q9BXT4 1180 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SHCBP1LQ9BZQ2 653 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 C17orf75Q9HAS0 396 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PRDM8Q9NQV8 689 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TCP11L1Q9NUJ3 509 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 MRGBPQ9NV56 204 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TMEM45AQ9NWC5 275 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 SELENONQ9NZV5 590 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 TMEM9Q9P0T7 183 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 LUZP4Q9P127 313 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 KIF17Q9P2E2 1029 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 LRWD1Q9UFC0 647 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PTBP2Q9UKA9 531 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PNMA2Q9UL42 364 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 C19orf53Q9UNZ5 99 aaPredicted RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 ERVK-11Q9UQG0 969 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 WBP11Q9Y2W2 641 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 NOSIPQ9Y314 301 aaKnown RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 DGKBQ9Y6T7 804 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 MED1Q15648 1581 aaPredicted RBP4.05□□□□□ -1.76
CMSS1-204ENST00000479555 AGLP35573 1532 aa4.05□□□□□ -1.76
CMSS1-204ENST00000479555 PALLDQ8WX93 1383 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 PIK3C2AO00443 1686 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 ADAMTSL3P82987 1691 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 MAP3K19Q56UN5 1328 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 PCDH11XQ9BZA7 1347 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 ARPC4-TTLL3A0A0A6YYG9 625 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 A0A1W2PRG0 241 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 MAGEB16A2A368 324 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 SNTNA6NMZ2 147 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 VWA5AO00534 786 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 DHHO43323 396 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 RAD51CO43502 376 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 CA12O43570 354 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 JRKO75564 520 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 TGDSO95455 350 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 NGFRP08138 427 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 FAM58BPP0C7Q3 252 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 TMIGD3P0DMS9 266 aaPredicted RBP4.04□□□□□ -1.76
CMSS1-204ENST00000479555 P4HA1P13674 534 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 GFAPP14136 432 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 MATN1P21941 496 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 PRKACBP22694 351 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 JAK1P23458 1154 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 CST5P28325 142 aaPredicted RBP4.04□□□□□ -1.76
CMSS1-204ENST00000479555 TACR3P29371 465 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 MARCKSP29966 332 aaPredicted RBP4.04□□□□□ -1.76
CMSS1-204ENST00000479555 CDC25CP30307 473 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 PKLRP30613 574 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 GTF2H1P32780 548 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 UBA7P41226 1012 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 NT5C2P49902 561 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 TUBP50607 506 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 C21orf59P57076 290 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 RPS3AP61247 264 aaKnown RBP4.04□□□□□ -1.76
CMSS1-204ENST00000479555 NAA20P61599 178 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 GPC5P78333 572 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 S100A12P80511 92 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 CREB5Q02930 508 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 PPATQ06203 517 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 RAD51Q06609 339 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 NIPAL4Q0D2K0 466 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 DNASE1L3Q13609 305 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 FHL3Q13643 280 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 DPYSQ14117 519 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 SQLEQ14534 574 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 RASA2Q15283 850 aa4.04□□□□□ -1.76
CMSS1-204ENST00000479555 NAB2Q15742 525 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms