RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 POU3F2P20265 443 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 LHCGRP22888 699 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 IL4RP24394 825 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 MAP4P27816 1152 aaKnown RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 CSTF2P33240 577 aaKnown RBP eCLIP6.56□□□□□ -1.36
VCP-205ENST00000479300 CYLC1P35663 651 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 ADCY8P40145 1251 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ACTR1BP42025 376 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 CD86P42081 329 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 STAT5AP42229 794 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 MAGEA1P43355 309 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ARSEP51690 589 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TAS2R40P59535 323 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ACTR1AP61163 376 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 GBE1Q04446 702 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 LRP8Q14114 963 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 GLE1Q53GS7 698 aaKnown RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 PRR30Q53SZ7 412 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 DCAF12Q5T6F0 453 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 RNF187Q5TA31 235 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 CCDC181Q5TID7 509 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 LRRC38Q5VT99 294 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TCTN3Q6NUS6 607 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 C16orf46Q6P387 395 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TMEM71Q6P5X7 295 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 RFLNAQ6ZTI6 216 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TSPAN33Q86UF1 283 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 NT5DC3Q86UY8 548 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 NLRP8Q86W28 1048 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 VSIG1Q86XK7 387 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 CCDC170Q8IYT3 715 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 MREGQ8N565 214 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 AVL9Q8NBF6 648 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ZFAND2BQ8WV99 257 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 PIH1D2Q8WWB5 315 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SH3KBP1Q96B97 665 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 LRRC45Q96CN5 670 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 FAF2Q96CS3 445 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SPDL1Q96EA4 605 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SCARF2Q96GP6 870 aaPredicted RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 SLC38A3Q99624 504 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 RIOK2Q9BVS4 552 aaKnown RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 TDRD1Q9BXT4 1180 aaKnown RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 PACSIN1Q9BY11 444 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 ASPSCR1Q9BZE9 553 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 GPR63Q9BZJ6 419 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 CENPHQ9H3R5 247 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 FAM83DQ9H4H8 585 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 RMI1Q9H9A7 625 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SIDT1Q9NXL6 827 aaKnown RBP6.56□□□□□ -1.36
VCP-205ENST00000479300 INTUQ9ULD6 942 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SLC17A4Q9Y2C5 497 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TMEM98Q9Y2Y6 226 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 SAR1BQ9Y6B6 198 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 MED13Q9UHV7 2174 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 APCP25054 2843 aa6.56□□□□□ -1.36
VCP-205ENST00000479300 TRBV23OR9-2A0A075B6M9 112 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CFAP73A6NFT4 308 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 HMGB1P1B2RPK0 211 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 ANKRD66B4E2M5 251 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PDLIM1O00151 329 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 KCNK1O00180 336 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 FZD6O60353 706 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 DNAJB5O75953 348 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 MTA2O94776 668 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 STK10O94804 968 aaKnown RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 CLDN7O95471 211 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SLC4A1P02730 911 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 HLA-DQB2P05538 268 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 TCN2P20062 427 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 DCTP40126 519 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 NR2C2P49116 596 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 STC1P52823 247 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 RAB15P59190 212 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 DYNLT1P63172 113 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 IFI35P80217 286 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 PTSQ03393 145 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PPIDQ08752 370 aaKnown RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 ABHD18Q0P651 414 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 GTF2H3Q13889 308 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PCSK7Q16549 785 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 TTMPQ5BVD1 217 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SNAP47Q5SQN1 464 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 ALG1LQ6GMV1 187 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 ASB18Q6ZVZ8 466 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 KDELC2Q7Z4H8 507 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 TECPR1Q7Z6L1 1165 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SDCCAG8Q86SQ7 713 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 TRIM74Q86UV6 250 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 ATCAYQ86WG3 371 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PHYKPLQ8IUZ5 450 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 GALNT11Q8NCW6 608 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 OR10G6Q8NH81 332 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SLC37A2Q8TED4 501 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SSC4DQ8WTU2 575 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms