RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	ARHGAP22	Q7Z5H3	698 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	DTX1	Q86Y01	620 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	RASGRP3	Q8IV61	690 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	NXPE1	Q8N323	547 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	FAM46D	Q8NEK8	389 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	TRIM58	Q8NG06	486 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	FLVCR1-AS1	Q8TAF5	88 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCHCR1	Q8TD31	782 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	BLOC1S5	Q8TDH9	187 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	COG1	Q8WTW3	980 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	NAT14	Q8WUY8	206 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	ZNF778	Q96MU6	729 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLC46A1	Q96NT5	459 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	PPP1R2P1	Q96PQ5	205 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	WDR83	Q9BRX9	315 aa	Known RBP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	GPR63	Q9BZJ6	419 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCDC86	Q9H6F5	360 aa	Known RBP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	POLR1B	Q9H9Y6	1135 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRDM8	Q9NQV8	689 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	LRIT1	Q9P2V4	623 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLC2A6	Q9UGQ3	507 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	KCNK6	Q9Y257	313 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	PCDHGA7	Q9Y5G6	932 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRSS21	Q9Y6M0	314 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLC30A1	Q9Y6M5	507 aa		4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	GOLGA4	Q13439	2230 aa	Known RBP	4.16	□□□□□ -1.74
POLR2B-208	ENST00000478188	CCDC187	A0A096LP49	1063 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	GOLGA6L3	A6NEY3	463 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ERI2	A8K979	691 aa	Known RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	EFS	O43281	561 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	PRAMEF1	O95521	474 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	CTSE	P14091	401 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	TPSB2	P20231	275 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ACRV1	P26436	265 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	IVD	P26440	423 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	FDFT1	P37268	417 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ACTR1B	P42025	376 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	LIMK2	P53671	638 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ERVPABLB-1	P60509	514 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ACTR1A	P61163	376 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	TMEM115	Q12893	351 aa	Predicted RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ILF3	Q12906	894 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	LAMB3	Q13751	1172 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	GBX1	Q14549	363 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	RPS6KA1	Q15418	735 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	TPSAB1	Q15661	275 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	LDLRAP1	Q5SW96	308 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ANKRD22	Q5VYY1	191 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	METRNL	Q641Q3	311 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	LRRTM4	Q86VH4	590 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	CAND1	Q86VP6	1230 aa	Known RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLC35F6	Q8N357	371 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	OR4D9	Q8NGE8	314 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	OR52K1	Q8NGK4	314 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	LKAAEAR1	Q8TD35	194 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ACTRT1	Q8TDG2	376 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	SCG3	Q8WXD2	468 aa	Known RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	SLCO2A1	Q92959	643 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	MS4A14	Q96JA4	679 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	ZNF578	Q96N58	590 aa	Predicted RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	MENT	Q9BUN1	341 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	RAB33B	Q9H082	229 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	OR52A5	Q9H2C5	316 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	MRM3	Q9HC36	420 aa	Known RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	PIH1D1	Q9NWS0	290 aa	Known RBP	4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	FOXJ2	Q9P0K8	574 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	CDYL	Q9Y232	598 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	APC2	O95996	2303 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	UNC13C	Q8NB66	2214 aa		4.15	□□□□□ -1.74
POLR2B-208	ENST00000478188	KIR2DS5	A0A0G2JLQ3	304 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188		A0A0G2JNG1	304 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	OR51F1	A6NGY5	319 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KIR2DS3	K7RE56	304 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KMO	O15229	486 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	FGG	P02679	453 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	MPO	P05164	745 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ITPKB	P27987	946 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	STIP1	P31948	543 aa	Known RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ARCN1	P48444	511 aa	Known RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	INHBC	P55103	352 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PSMA6	P60900	246 aa	Known RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	GABRE	P78334	506 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TLE3	Q04726	772 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	C19orf57	Q0VDD7	668 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KIR2DS5	Q14953	304 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SWI5	Q1ZZU3	235 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PLA2G4E	Q3MJ16	856 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	TSTD2	Q5T7W7	516 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SEL1L2	Q5TEA6	688 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	NKAIN2	Q5VXU1	208 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	KIAA1614	Q5VZ46	1190 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	PAPD7	Q5XG87	772 aa	Known RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	WDR74	Q6RFH5	385 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	SNX20	Q7Z614	316 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	ZNF761	Q86XN6	746 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	GALNT6	Q8NCL4	622 aa		4.15	□□□□□ -1.75
POLR2B-208	ENST00000478188	OR2L2	Q8NH16	312 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms