RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CIPCQ9C0C6 399 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ASB8Q9H765 288 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CMTM6Q9NX76 183 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 NDUFA13Q9P0J0 144 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CFAP97Q9P2B7 532 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 IGLV3-16A0A075B6K0 115 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ASPDHA6ND91 283 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 HNRNPRO43390 633 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 OR4F21O95013 312 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CDKL1Q00532 357 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 GTF2H2Q13888 395 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 PTPRRQ15256 657 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 GTF2H2CQ6P1K8 395 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 Q6ZSR9 355 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ERMP1Q7Z2K6 904 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 BBS7Q8IWZ6 715 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ULK4Q96C45 1275 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 SLC45A3Q96JT2 553 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF641Q96N77 438 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ASB1Q9Y576 335 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TIMM22Q9Y584 194 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 AP4B1Q9Y6B7 739 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 GPIP06744 558 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 FESP07332 822 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 POLR2JP52435 117 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 DIO3P55073 304 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TRAF3Q13114 568 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 INPP5AQ14642 412 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ATP6AP1LQ52LC2 224 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 LETMD1Q6P1Q0 360 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 FAM151BQ6UXP7 276 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 FIBCD1Q8N539 461 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 PAPD5Q8NDF8 572 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 PHC3Q8NDX5 983 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 SCRN2Q96FV2 425 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 NTMT1Q9BV86 223 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TRPS1Q9UHF7 1281 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CNOT6Q9ULM6 557 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 MTCL1Q9Y4B5 1905 aaKnown RBP12.02□□□□□ -0.48
PTPRF-212ENST00000477970 NCF1BA6NI72 391 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 EIF4E1BA6NMX2 242 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 NCF1CA8MVU1 366 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 LEFTY2O00292 366 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 LRG1P02750 347 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 C7P10643 843 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 UMPSP11172 480 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 SRCP12931 536 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 NCF1P14598 390 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 PIK3CGP48736 1102 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 EPHA5P54756 1037 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CYP4F8P98187 520 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 GBX1Q14549 363 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 TTLL9Q3SXZ7 439 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 PITRM1Q5JRX3 1037 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 INTS11Q5TA45 600 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 GBP5Q96PP8 586 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 OSBPL11Q9BXB4 747 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 TM6SF2Q9BZW4 377 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 NOL11Q9H8H0 719 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CCL27Q9Y4X3 112 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 KANSL1LA0AUZ9 987 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 LSM1O15116 133 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 TAPBPO15533 448 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 AHCYL1O43865 530 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ENO2P09104 434 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 PABPC4LP0CB38 370 aaKnown RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ACRP10323 421 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ATP6V1B2P21281 511 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 JAK1P23458 1154 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CD70P32970 193 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 NSG1P42857 185 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ECT2LQ008S8 904 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 MAD2L1Q13257 205 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-212ENST00000477970 DMC1Q14565 340 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 RAB30Q15771 203 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 MYLK3Q32MK0 819 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 DGKKQ5KSL6 1271 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ELMOD1Q8N336 334 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 PPP3R2Q96LZ3 170 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 CD244Q9BZW8 370 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 ZDHHC3Q9NYG2 299 aa12.02□□□□□ -0.49
PTPRF-212ENST00000477970 IQCF5A8MTL0 148 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 WASH3PC4AMC7 463 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TNFAIP8O95379 198 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CLDN7O95471 211 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CKMP06732 381 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 ZCCHC18P0CG32 403 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 HTR1EP28566 365 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms