RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 LIMA1Q9UHB6 759 aaKnown RBP19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 TMPRSS11EQ9UL52 423 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 SHOC2Q9UQ13 582 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 ZNF711Q9Y462 761 aa19.75■□□□□ 0.75
PDLIM1-202ENST00000477757 PIRTP0C851 137 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 MYBL1P10243 752 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 BPIP17213 487 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 HNRNPH3P31942 346 aaKnown RBP19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 GTF2H3Q13889 308 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 CCDC122Q5T0U0 273 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 MCEMP1Q8IX19 187 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 TTC30BQ8N4P2 665 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 FAM71BQ8TC56 605 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 TM9SF4Q92544 642 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 TRIM11Q96F44 468 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 TLR10Q9BXR5 811 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 MAGEE1Q9HCI5 957 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 AGPAT4Q9NRZ5 378 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 FANCLQ9NW38 375 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 MYO6Q9UM54 1294 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 PADI2Q9Y2J8 665 aa19.74■□□□□ 0.75
PDLIM1-202ENST00000477757 ZFHX3Q15911 3703 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 LRRTM2O43300 516 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 KLHL41O60662 606 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 CD48P09326 243 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 MTHFD1P11586 935 aaKnown RBP19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 KPNA2P52292 529 aaKnown RBP19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 PIGHQ14442 188 aaPredicted RBP19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 ZNF789Q5FWF6 425 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 Q6ZS92 163 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 AMZ2Q86W34 360 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 NIPA2Q8N8Q9 360 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 IP6K3Q96PC2 410 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 DHRS4Q9BTZ2 278 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 ACTR5Q9H9F9 607 aaPredicted RBP19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 MYO1AQ9UBC5 1043 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 PSMD13Q9UNM6 376 aa19.73■□□□□ 0.75
PDLIM1-202ENST00000477757 E2F3O00716 465 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 IPO13O94829 963 aaKnown RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 OTX2P32243 289 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 TMEM115Q12893 351 aaPredicted RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 PTCHD3Q3KNS1 767 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 DCAF10Q5QP82 559 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 CCDC183Q5T5S1 534 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 FAM83HQ6ZRV2 1179 aaPredicted RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 CUZD1Q86UP6 607 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 ZC3H18Q86VM9 953 aaKnown RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 GALNT16Q8N428 558 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 CLEC1AQ8NC01 280 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 ANKRD20A12PQ8NF67 263 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 LRRN4Q8WUT4 740 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 FER1L6-AS2Q96M78 137 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 PPM1MQ96MI6 270 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 DPH2Q9BQC3 489 aaPredicted RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 GPR63Q9BZJ6 419 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 XPO4Q9C0E2 1151 aaKnown RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 NUP62CLQ9H1M0 184 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 ZNF552Q9H707 407 aaPredicted RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 IMP3Q9NV31 184 aaKnown RBP19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 DCHS2Q6V1P9 2916 aa19.72■□□□□ 0.75
PDLIM1-202ENST00000477757 C9J4A7 227 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ZG16O60844 167 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 LCA5LO95447 670 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 MSL3P1P0C860 447 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 CYP2A7P20853 494 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ARSEP51690 589 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 DPYSL3Q14195 570 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 LLGL1Q15334 1064 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ATP13A5Q4VNC0 1218 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 SP5Q6BEB4 398 aaPredicted RBP19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ARMC6Q6NXE6 501 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 FBXO38Q6PIJ6 1188 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ZNF571Q7Z3V5 609 aaPredicted RBP19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 ZADH2Q8N4Q0 377 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 OR1L3Q8NH93 324 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 GDAP1Q8TB36 358 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 HDAC11Q96DB2 347 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 HAUS4Q9H6D7 363 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 SYTL2Q9HCH5 934 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 POMT2Q9UKY4 750 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 PIKFYVEQ9Y2I7 2098 aa19.71■□□□□ 0.75
PDLIM1-202ENST00000477757 HEATR9A2RTY3 570 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 OR6C74A6NCV1 312 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 TMEM150CB9EJG8 249 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 DDX3XO00571 662 aaKnown RBP eCLIP19.7■□□□□ 0.741e-17■■■■□ 26
PDLIM1-202ENST00000477757 KLF7O75840 302 aaPredicted RBP19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 IGHEP01854 428 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 MX2P20592 715 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 ITGA3P26006 1051 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 CA5AP35218 305 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 HADHAP40939 763 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 GLRBP48167 497 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 GBE1Q04446 702 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 ADCY2Q08462 1091 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 XRCC4Q13426 336 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 HGSNATQ68CP4 663 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 DUS1LQ6P1R4 473 aaKnown RBP19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 SPOCD1Q6ZMY3 1216 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 KCNMB4Q86W47 210 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 CNTD1Q8N815 330 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms