RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PLA2G4FQ68DD2 849 aa4□□□□□ -1.77
UBR3-209ENST00000477461 APOBEC3HQ6NTF7 200 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 CDC42EP5Q6NZY7 148 aa4□□□□□ -1.77
UBR3-209ENST00000477461 USP50Q70EL3 339 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 APOBEC3FQ8IUX4 373 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 ODF3L1Q8IXM7 274 aa4□□□□□ -1.77
UBR3-209ENST00000477461 GJC3Q8NFK1 279 aa4□□□□□ -1.77
UBR3-209ENST00000477461 DCPSQ96C86 337 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 RRP36Q96EU6 259 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 ZC3HAV1LQ96H79 300 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 PRMT6Q96LA8 375 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 TTC14Q96N46 770 aa4□□□□□ -1.77
UBR3-209ENST00000477461 LBHD1Q9BQE6 289 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 H2AFJQ9BTM1 129 aa4□□□□□ -1.77
UBR3-209ENST00000477461 LSG1Q9H089 658 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 TTYH1Q9H313 450 aaPredicted RBP4□□□□□ -1.77
UBR3-209ENST00000477461 PLEKHA4Q9H4M7 779 aa4□□□□□ -1.77
UBR3-209ENST00000477461 C20orf141Q9NUB4 165 aa4□□□□□ -1.77
UBR3-209ENST00000477461 MCM9Q9NXL9 1143 aa4□□□□□ -1.77
UBR3-209ENST00000477461 CISD1Q9NZ45 108 aaKnown RBP4□□□□□ -1.77
UBR3-209ENST00000477461 CTNNAL1Q9UBT7 734 aa4□□□□□ -1.77
UBR3-209ENST00000477461 SARDHQ9UL12 918 aa4□□□□□ -1.77
UBR3-209ENST00000477461 WDR90Q96KV7 1748 aa4□□□□□ -1.77
UBR3-209ENST00000477461 LAMB1P07942 1786 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ZMYM6O95789 1325 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 FLT1P17948 1338 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 FAM172BPA6NC97 362 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ANTXRLA6NF34 631 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 J3KRW8 73 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 TACC1O75410 805 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 TIPRLO75663 272 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 WDHD1O75717 1129 aaPredicted RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 MT-CYBP00156 380 aaPredicted RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 ITGAXP20702 1163 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 MARK3P27448 753 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 PSMA5P28066 241 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 POU1F1P28069 291 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ABCD1P33897 745 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 NF2P35240 595 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 CPOXP36551 454 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ATP12AP54707 1039 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 EIF3BP55884 814 aaKnown RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 CLDN2P57739 230 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 HAND2P61296 217 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 MPP1Q00013 466 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ITGADQ13349 1161 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 KRT32Q14532 448 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 RNPS1Q15287 305 aaKnown RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 SLC9B1Q4ZJI4 515 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 FKBP1CQ5VVH2 108 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 CPLX2Q6PUV4 134 aaKnown RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 MFSD6Q6ZSS7 791 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 DSG4Q86SJ6 1040 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 SPATA22Q8NHS9 363 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 FAM151AQ8WW52 585 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ZUFSPQ96AP4 578 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 SAAL1Q96ER3 474 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ZBED3Q96IU2 234 aaPredicted RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 KXD1Q9BQD3 176 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 IDI2Q9BXS1 227 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 NUF2Q9BZD4 464 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 KRT23Q9C075 422 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 RNF41Q9H4P4 317 aaPredicted RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 FBRSL1Q9HCM7 1045 aaKnown RBP3.99□□□□□ -1.77
UBR3-209ENST00000477461 SMYD2Q9NRG4 433 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 TAS2R10Q9NYW0 307 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 ARHGAP26Q9UNA1 814 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 NFE2L3Q9Y4A8 694 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 A3GALT2U3KPV4 340 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 LAMA4Q16363 1823 aa3.99□□□□□ -1.77
UBR3-209ENST00000477461 TEX13CA0A0J9YWL9 993 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 TTC36A6NLP5 189 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 HSPB2A8KAH6 182 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 KLK8O60259 260 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 NDUFB4O95168 129 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 TFP02787 698 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 PCP11498 1178 aaKnown RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 SRCP12931 536 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 GM2AP17900 193 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 CD58P19256 250 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 AGAP20933 346 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 HNRNPH1P31943 449 aaKnown RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 HSPA4P34932 840 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 EFNA5P52803 228 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 CASP6P55212 293 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 TDGQ13569 410 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 NECTIN1Q15223 517 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 HSPB2Q16082 182 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 SYT16Q17RD7 645 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 ACCSLQ4AC99 568 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 SBK1Q52WX2 424 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 FAM69AQ5T7M9 428 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 C12orf60Q5U649 245 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 CTR9Q6PD62 1173 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 BLOC1S2Q6QNY1 142 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 GPAT4Q86UL3 456 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 KIAA2013Q8IYS2 634 aa3.98□□□□□ -1.77
UBR3-209ENST00000477461 ZNF444Q8N0Y2 327 aaPredicted RBP3.98□□□□□ -1.77
UBR3-209ENST00000477461 DMBX1Q8NFW5 382 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms