RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KYQ8NBH2 561 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 FBF1Q8TES7 1133 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 HEXDCQ8WVB3 486 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 LINC00615Q96LM1 132 aaPredicted RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 TCF12Q99081 682 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 SLC30A3Q99726 388 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 TIMM29Q9BSF4 260 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 CCM2Q9BSQ5 444 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 TXLNGYQ9BZA5 131 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 VPS37BQ9H9H4 285 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 UNC13CQ8NB66 2214 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 FLRT2O43155 660 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 AP2A2O94973 939 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 ACSL3O95573 720 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 RPS3P23396 243 aaKnown RBP eCLIP15.58■□□□□ 0.08
COPS3-207ENST00000477299 CCR7P32248 378 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 CLCA4Q14CN2 919 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 PROX2Q3B8N5 592 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 KBTBD12Q3ZCT8 623 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 C6orf132Q5T0Z8 1188 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 METRNLQ641Q3 311 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 OGFOD3Q6PK18 319 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 VRK3Q8IV63 474 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 OR2L2Q8NH16 312 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 ZDHHC1Q8WTX9 485 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 UBXN4Q92575 508 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 MRRFQ96E11 262 aaKnown RBP15.58■□□□□ 0.08
COPS3-207ENST00000477299 ATXN7L3BQ96GX2 97 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 ZNF514Q96K75 400 aaPredicted RBP15.58■□□□□ 0.08
COPS3-207ENST00000477299 CNDP2Q96KP4 475 aaKnown RBP15.58■□□□□ 0.08
COPS3-207ENST00000477299 NDNQ99608 321 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 TTC1Q99614 292 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 FAM167BQ9BTA0 163 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 FAM129AQ9BZQ8 928 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 RABGEF1Q9UJ41 708 aa15.58■□□□□ 0.08
COPS3-207ENST00000477299 DNMT3AQ9Y6K1 912 aaPredicted RBP15.58■□□□□ 0.08
COPS3-207ENST00000477299 SPAARA0A1B0GVQ0 90 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 FAM159BA6NKW6 160 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 TPP1O14773 563 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 OR56A5P0C7T3 313 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 PKMP14618 531 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 CLCNKAP51800 687 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 DMPKQ09013 629 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 LRP8Q14114 963 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 PTRHD1Q6GMV3 140 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 LVRNQ6Q4G3 990 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 ZNF761Q86XN6 746 aaPredicted RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 RELL1Q8IUW5 271 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 GPR156Q8NFN8 814 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 CALML6Q8TD86 181 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 ELMO1Q92556 727 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 NRTNQ99748 197 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 PARD6BQ9BYG5 372 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 WWP1Q9H0M0 922 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 EPB41L4BQ9H329 900 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 COG4Q9H9E3 785 aa15.57■□□□□ 0.08
COPS3-207ENST00000477299 SARS2Q9NP81 518 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 INTS10Q9NVR2 710 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 ZNF624Q9P2J8 865 aaPredicted RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 CDV3Q9UKY7 258 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 CFAP20Q9Y6A4 193 aaKnown RBP15.57■□□□□ 0.08
COPS3-207ENST00000477299 OR52A4PA6NMU1 304 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 PDZK1P1A8MUH7 402 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 LDOC1O95751 146 aaPredicted RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 IDSP22304 550 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 AOAHP28039 575 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 TNFRSF8P28908 595 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 PPARGP37231 505 aaPredicted RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 BOP1Q14137 746 aaKnown RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 PERM1Q5SV97 790 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 DUS1LQ6P1R4 473 aaKnown RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 GUSBP11Q6P575 273 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 IYDQ6PHW0 289 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 STRA8Q7Z7C7 330 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 SLCO6A1Q86UG4 719 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 C17orf82Q86X59 251 aaPredicted RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 ARL14Q8N4G2 192 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 SLC37A2Q8TED4 501 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 RMDN2Q96LZ7 410 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 INSM2Q96T92 566 aaPredicted RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 MCMBPQ9BTE3 642 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 AARSD1Q9BTE6 412 aaKnown RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 ZFATQ9P243 1243 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 TSR3Q9UJK0 312 aaKnown RBP15.56■□□□□ 0.08
COPS3-207ENST00000477299 CDYLQ9Y232 598 aa15.56■□□□□ 0.08
COPS3-207ENST00000477299 SPTBN4Q9H254 2564 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 COL27A1Q8IZC6 1860 aaPredicted RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 SLC5A10A0PJK1 596 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 CPED1A4D0V7 1026 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 PPM1DO15297 605 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 F3P13726 295 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 SLC19A1P41440 591 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 CDKN2DP55273 166 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 CLDN6P56747 220 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 TRIP6Q15654 476 aaKnown RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 CCDC157Q569K6 752 aa15.55■□□□□ 0.08
COPS3-207ENST00000477299 RNF187Q5TA31 235 aaPredicted RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 ZCCHC8Q6NZY4 707 aaKnown RBP15.55■□□□□ 0.08
COPS3-207ENST00000477299 CTAGE3PQ8IX95 158 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms