RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PITRM1Q5JRX3 1037 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 HMBOX1Q6NT76 420 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PRR23BQ6ZRT6 265 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 ZBTB49Q6ZSB9 765 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 FRA10AC1Q70Z53 315 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PTRH1Q86Y79 214 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 NAT14Q8WUY8 206 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 PIH1D2Q8WWB5 315 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 MYO19Q96H55 970 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 SARS2Q9NP81 518 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 EIF2B4Q9UI10 523 aaKnown RBP16.23■□□□□ 0.19
TMEM53-208ENST00000476724 VPS51Q9UID3 782 aa16.23■□□□□ 0.19
TMEM53-208ENST00000476724 GFRA2O00451 464 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 GPIP06744 558 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 MAPK8P45983 427 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 EEFSECP57772 596 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CDH18Q13634 790 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 AASDHQ4L235 1098 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 TBCELQ5QJ74 424 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 C6orf136Q5SQH8 315 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 INTS11Q5TA45 600 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 LYPLAL1Q5VWZ2 237 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 AMIGO2Q86SJ2 522 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 SATL1Q86VE3 508 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 GRIN3AQ8TCU5 1115 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 MRPS31Q92665 395 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 TMEM125Q96AQ2 219 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 ALG14Q96F25 216 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CLPBQ9H078 707 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 APPL1Q9UKG1 709 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 FNDC3AQ9Y2H6 1198 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 FCF1Q9Y324 198 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 IFRD1O00458 451 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 RAD51BO15315 384 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 SYNCRIPO60506 623 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 TIPRLO75663 272 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 PGM3O95394 542 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 UMPSP11172 480 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 FCGR1AP12314 374 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 ZFP36L2P47974 494 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CSNK1DP48730 415 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 RGS4P49798 205 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 PRKCQQ04759 706 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CAPRIN1Q14444 709 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 PTRHD1Q6GMV3 140 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 Q6ZNB5 142 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 METTL3Q86U44 580 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CAMK1DQ8IU85 385 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 SPPL2CQ8IUH8 684 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 PLEKHG4BQ96PX9 1271 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 CIB1Q99828 191 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 C2orf49Q9BVC5 232 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 SMG9Q9H0W8 520 aaKnown RBP16.22■□□□□ 0.19
TMEM53-208ENST00000476724 GNPTGQ9UJJ9 305 aa16.22■□□□□ 0.19
TMEM53-208ENST00000476724 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 HELZP42694 1942 aaKnown RBP16.21■□□□□ 0.19
TMEM53-208ENST00000476724 CKMP06732 381 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 FASP25445 335 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 CALRP27797 417 aaKnown RBP16.21■□□□□ 0.19
TMEM53-208ENST00000476724 CSKP41240 450 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ERVPABLB-1P60509 514 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 UFM1P61960 85 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 PRKG2Q13237 762 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 APOFQ13790 326 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 IYDQ6PHW0 289 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 SNX20Q7Z614 316 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 FAM217AQ8IXS0 508 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 RBFAQ8N0V3 343 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 CDYL2Q8N8U2 506 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 FNDC5Q8NAU1 212 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 OR2T11Q8NH01 316 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ACDQ96AP0 544 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ESAMQ96AP7 390 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 EID2BQ96D98 161 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 PRPF18Q99633 342 aaKnown RBP16.21■□□□□ 0.19
TMEM53-208ENST00000476724 SLC29A1Q99808 456 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ALG2Q9H553 416 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ZFYVE1Q9HBF4 777 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 ST14Q9Y5Y6 855 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 CHD9Q3L8U1 2897 aa16.21■□□□□ 0.19
TMEM53-208ENST00000476724 RANBP2P49792 3224 aaKnown RBP16.21■□□□□ 0.19
TMEM53-208ENST00000476724 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 OTCP00480 354 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 CA3P07451 260 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 EPCAMP16422 314 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 NR1H2P55055 460 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 EMX2Q04743 252 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 DYNC1I2Q13409 638 aaKnown RBP16.2■□□□□ 0.18
TMEM53-208ENST00000476724 ATXN7L2Q5T6C5 722 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-208ENST00000476724 SBSNQ6UWP8 590 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 Q6ZSR9 355 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 SERPINA9Q86WD7 417 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 CARM1Q86X55 608 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 ELMOD1Q8N336 334 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 MFSD2AQ8NA29 543 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 PDPRQ8NCN5 879 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 TRPV3Q8NET8 790 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 METTL6Q8TCB7 284 aa16.2■□□□□ 0.18
TMEM53-208ENST00000476724 BHMTQ93088 406 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms