RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAM90A10PA6NDY2 464 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 OR5K3A6NET4 321 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 ANKUB1A6NFN9 424 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 TMEM221A6NGB7 291 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 GCNT3O95395 438 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 PMS2P2O95744 297 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 HLA-DOBP13765 273 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 ITGA2P17301 1181 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 TMPOP42166 694 aaKnown RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 PDLIM4P50479 330 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 TERF1P54274 439 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 ISL1P61371 349 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 PNRC1Q12796 327 aaPredicted RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 TRAF2Q12933 501 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 DLG1Q12959 904 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 VWC2Q2TAL6 325 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 AWAT2Q6E213 333 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 FAM198BQ6UWH4 519 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 DNAJB7Q7Z6W7 309 aaPredicted RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 TMEM173Q86WV6 379 aaPredicted RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 BBS10Q8TAM1 723 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 VOPP1Q96AW1 172 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 MTBPQ96DY7 904 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 OR1F2PQ96R84 312 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 NUP85Q9BW27 656 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 CSTL1Q9H114 145 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 ALDH8A1Q9H2A2 487 aaPredicted RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 DPAGT1Q9H3H5 408 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 PIH1D3Q9NQM4 214 aaKnown RBP5.75□□□□□ -1.49
VPS50-212ENST00000476413 ANAPC5Q9UJX4 755 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 OR2W1Q9Y3N9 320 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 LIPGQ9Y5X9 500 aa5.75□□□□□ -1.49
VPS50-212ENST00000476413 TRIM77I1YAP6 450 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 TBCAO75347 108 aaKnown RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 MED24O75448 989 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 CAMTA2O94983 1202 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 OAZ2O95190 189 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 PRSS2P07478 247 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 ACHEP22303 614 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 NPY4RP50391 375 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 ZNF234Q14588 700 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 NR1D2Q14995 579 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 HLFQ16534 295 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 ZNF260Q3ZCT1 412 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 MEPCEQ7L2J0 689 aaKnown RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 CEP57L1Q8IYX8 460 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 MAML2Q8IZL2 1156 aaPredicted RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 RNF113BQ8IZP6 322 aaKnown RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 PAPD5Q8NDF8 572 aaKnown RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 SIPA1Q96FS4 1042 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 TMEM19Q96HH6 336 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 FAM81BQ96LP2 452 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 TBC1D17Q9HA65 648 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 OSER1Q9NX31 292 aa5.74□□□□□ -1.49
VPS50-212ENST00000476413 CHCHD3Q9NX63 227 aaKnown RBP5.74□□□□□ -1.49
VPS50-212ENST00000476413 ZCWPW2A0A1B0GU75 182 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 PRSS51A0A1B0GVH4 220 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 PTGESO14684 152 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 XRCC3O43542 346 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 CYP11B2P19099 503 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 HOXC8P31273 242 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 GP5P40197 560 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 TUBA1BP68363 451 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 KRT83P78385 493 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 EGR4Q05215 589 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 ZNF273Q14593 569 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 PTPRCAPQ14761 206 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 TNIP1Q15025 636 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 ASB18Q6ZVZ8 466 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 FBXL14Q8N1E6 418 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 CAMKVQ8NCB2 501 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 EXD1Q8NHP7 514 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 SMPDL3BQ92485 455 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 FAM84BQ96KN1 310 aaPredicted RBP5.73□□□□□ -1.49
VPS50-212ENST00000476413 LRRC3BQ96PB8 259 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 HHATLQ9HCP6 504 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 NPAP1Q9NZP6 1156 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 FLT1P17948 1338 aa5.73□□□□□ -1.49
VPS50-212ENST00000476413 SOS1Q07889 1333 aaPredicted RBP5.73□□□□□ -1.49
VPS50-212ENST00000476413 CCDC188H7C350 402 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 DVL1O14640 695 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 ACAA1P09110 424 aaPredicted RBP5.72□□□□□ -1.49
VPS50-212ENST00000476413 OR52Z1P0C646 297 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 FAM106CPP0CH98 169 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 FCGR1AP12314 374 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 ERCC2P18074 760 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 RBP5P82980 135 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 RELQ04864 619 aaPredicted RBP5.72□□□□□ -1.49
VPS50-212ENST00000476413 ACSM1Q08AH1 577 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 PPIGQ13427 754 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-212ENST00000476413 GCNT6Q5T4J0 391 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 GRTP1Q5TC63 336 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 TRNP1Q6NT89 227 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 ZNF704Q6ZNC4 412 aaPredicted RBP5.72□□□□□ -1.49
VPS50-212ENST00000476413 ERN2Q76MJ5 926 aaKnown RBP5.72□□□□□ -1.49
VPS50-212ENST00000476413 ADHFE1Q8IWW8 467 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 ELP5Q8TE02 316 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 SPATA17Q96L03 361 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 TTC14Q96N46 770 aa5.72□□□□□ -1.49
VPS50-212ENST00000476413 LRMDAQ9H2I8 198 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms