RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TMC8Q8IU68 726 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 KRTAP19-1Q8IUB9 90 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SERPINA12Q8IW75 414 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 KDM8Q8N371 416 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 C8orf58Q8NAV2 365 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 DENND6BQ8NEG7 585 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 WDR20Q8TBZ3 569 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 HM13Q8TCT9 377 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TAS1R2Q8TE23 839 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 UBLCP1Q8WVY7 318 aaPredicted RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 NSMAFQ92636 917 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 BCL2L2Q92843 193 aaPredicted RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CLMNQ96JQ2 1002 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 KLHL5Q96PQ7 755 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 OLFM1Q99784 485 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CDT1Q9H211 546 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 FN3KQ9H479 309 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RAD21L1Q9H4I0 556 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RNPEPL1Q9HAU8 725 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 DDX4Q9NQI0 724 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SLC35D1Q9NTN3 355 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 DNAJC11Q9NVH1 559 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TBC1D7Q9P0N9 293 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 STK39Q9UEW8 545 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 HPCAL4Q9UM19 191 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 LAMP3Q9UQV4 416 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 INSL6Q9Y581 213 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TRBV5-7A0A0A0MS05 114 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 EIF4E1BA6NMX2 242 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 FOXO6A8MYZ6 492 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CLDN4O14493 209 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SLC16A5O15375 505 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 LETM1O95202 739 aaPredicted RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SNX4O95219 450 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ACSL3O95573 720 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SLC16A8O95907 504 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 TGFAP01135 160 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CYC1P08574 325 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 TSPY4P0CV99 314 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 TSPY10P0CW01 314 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 C8orf89P0DMQ9 161 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 UBA1P22314 1058 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PROZP22891 400 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 NR2F2P24468 414 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CD27P26842 260 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 RPA1P27694 616 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SFNP31947 248 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CHRNA3P32297 505 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ACAA2P42765 397 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 HNMTP50135 292 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PTENP60484 403 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SNRPEP62304 92 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 STIM1Q13586 685 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 KARSQ15046 597 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 OASLQ15646 514 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 MEP1AQ16819 746 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 UGP2Q16851 508 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SLC9C1Q4G0N8 1177 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CCDC40Q4G0X9 1142 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PLEKHO1Q53GL0 409 aaPredicted RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ENTPD8Q5MY95 495 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PAPD4Q6PIY7 484 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ENPP7Q6UWV6 458 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 FAM57BQ71RH2 274 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 DENND6AQ8IWF6 608 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 DDIASQ8IXT1 998 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 BATF2Q8N1L9 274 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 GALNT16Q8N428 558 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC57Q8N9N7 239 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SCCPDHQ8NBX0 429 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CCNYQ8ND76 341 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 OR1J2Q8NGS2 313 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 EXD1Q8NHP7 514 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 OCC1Q8TAD7 63 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 CTNNBL1Q8WYA6 563 aaPredicted RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SHC3Q92529 594 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 AP2M1Q96CW1 435 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SPDL1Q96EA4 605 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF560Q96MR9 790 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 KCNK16Q96T55 309 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PKP2Q99959 881 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 PPIL3Q9H2H8 161 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 AAMDCQ9H7C9 122 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 SRD5A3Q9H8P0 318 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 HINT3Q9NQE9 182 aaKnown RBP4.12□□□□□ -1.75
VPS13D-207ENST00000476169 P4HTMQ9NXG6 502 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 DPP3Q9NY33 737 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 RNF150Q9ULK6 438 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 MYRFQ9Y2G1 1151 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 TEX264Q9Y6I9 313 aa4.12□□□□□ -1.75
VPS13D-207ENST00000476169 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 C17orf102A2RUQ5 167 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 C5orf51A6NDU8 294 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 WIPF3A6NGB9 483 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 C5orf52A6NGY3 159 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ARHGAP42A6NI28 874 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 GPR89AB7ZAQ6 455 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 F8W810 466 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms