RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 ADAMTSL2Q86TH1 951 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 TMC8Q8IU68 726 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 FIBCD1Q8N539 461 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
UBXN11-214ENST00000475591 RIN3Q8TB24 985 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 PIP4K2CQ8TBX8 421 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 PDLIM5Q96HC4 596 aaKnown RBP13.88□□□□□ -0.19
UBXN11-214ENST00000475591 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
UBXN11-214ENST00000475591 FAM192AQ9GZU8 254 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 IPPKQ9H8X2 491 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
UBXN11-214ENST00000475591 STAMBPO95630 424 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 G6PDP11413 515 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 HSD17B1P14061 328 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ATP6V1B1P15313 513 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ITGALP20701 1170 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 TRAF3Q13114 568 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■■■■ 29.3
UBXN11-214ENST00000475591 TBCELQ5QJ74 424 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PRMT9Q6P2P2 845 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 CERS6Q6ZMG9 384 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PRPF18Q99633 342 aaKnown RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 EGFL8Q99944 293 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 CENPKQ9BS16 269 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 SPATA16Q9BXB7 569 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 SLC2A11Q9BYW1 496 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 FARSBQ9NSD9 589 aaKnown RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ABCB8Q9NUT2 735 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 CCL26Q9Y258 94 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PDLIM1O00151 329 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PLOD2O00469 737 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 EEDO75530 441 aaKnown RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ACRP10323 421 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 PRMT2P55345 433 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 LIPEQ05469 1076 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 NR6A1Q15406 480 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 RFTN2Q52LD8 501 aaPredicted RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ITIH5Q86UX2 942 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ZNF597Q96LX8 424 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 TMEM79Q9BSE2 394 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ALG2Q9H553 416 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 RIC8BQ9NVN3 520 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 POLR3HQ9Y535 204 aaPredicted RBP13.87□□□□□ -0.19
UBXN11-214ENST00000475591 V9GYQ6 96 aa13.87□□□□□ -0.19
UBXN11-214ENST00000475591 TRBV5-4A0A0C4DH59 114 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ARHGAP10A1A4S6 786 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LSM1O15116 133 aaKnown RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 RAD51BO15315 384 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 S100BP04271 92 aaPredicted RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 FESP07332 822 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 SRCP12931 536 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 CSF2RAP15509 400 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 RPS3P23396 243 aaKnown RBP eCLIP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 DGKQP52824 942 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 PRKCQQ04759 706 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 PDCD4Q53EL6 469 aaKnown RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 CRTC1Q6UUV9 634 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 HTR3DQ70Z44 454 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ZBTB2Q8N680 514 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 METTL25Q8N6Q8 603 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ACDQ96AP0 544 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ZUFSPQ96AP4 578 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 HCFC1R1Q9NWW0 138 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 PTBP2Q9UKA9 531 aaKnown RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LEFTY2O00292 366 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 INPP4BO15327 924 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LILRB3O75022 631 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 IGSF6O95976 241 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 MT-ND1P03886 318 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 TFAP2AP05549 437 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LAG3P18627 525 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 HLA-FP30511 346 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 SELPLGQ14242 412 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LRRC66Q68CR7 880 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 LCN8Q6JVE9 175 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 NANOGP8Q6NSW7 305 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 EPHX4Q8IUS5 362 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 CHERPQ8IWX8 916 aaKnown RBP13.86□□□□□ -0.19
UBXN11-214ENST00000475591 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
UBXN11-214ENST00000475591 OR2AP1Q8NGE2 309 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms