RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 SPACA3Q8IXA5 215 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 ZNF248Q8NDW4 579 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 HM13Q8TCT9 377 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 ACTRT1Q8TDG2 376 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 HNRNPLLQ8WVV9 542 aaKnown RBP20.59■□□□□ 0.89
SIKE1-208ENST00000475335 CRELD1Q96HD1 420 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 CMKLR1Q99788 373 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 ACSL6Q9UKU0 697 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 PSMD13Q9UNM6 376 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 SSUH2Q9Y2M2 353 aa20.59■□□□□ 0.89
SIKE1-208ENST00000475335 CFAP99D6REC4 459 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 AGRPO00253 132 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 GAS8O95995 478 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 RALBP11234 206 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 CCL4P13236 92 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 COILP38432 576 aaPredicted RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 TLE3Q04726 772 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 CCDC173Q0VFZ6 552 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 LAMB3Q13751 1172 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 KCNJ11Q14654 390 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 TRIP13Q15645 432 aaPredicted RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 PACS1Q6VY07 963 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 TAS2R42Q7RTR8 314 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 ARHGAP22Q7Z5H3 698 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 TRIM48Q8IWZ4 208 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 RBM12BQ8IXT5 1001 aaKnown RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 CLDN19Q8N6F1 224 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 SPDYE1Q8NFV5 336 aaPredicted RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 PEX13Q92968 403 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 HDAC10Q969S8 669 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 MAGOHBQ96A72 148 aaKnown RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 AHCYL2Q96HN2 611 aaKnown RBP20.58■□□□□ 0.89
SIKE1-208ENST00000475335 RMDN2Q96LZ7 410 aa20.58■□□□□ 0.89
SIKE1-208ENST00000475335 SMG1Q96Q15 3661 aaKnown RBP20.58■□□□□ 0.88
SIKE1-208ENST00000475335 C9orf172C9J069 976 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ZNF185O15231 689 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 RRP8O43159 456 aaKnown RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 GOT2P00505 430 aaKnown RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 C9P02748 559 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 JMJD7P0C870 316 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 MTHFD1P11586 935 aaKnown RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 SLC5A2P31639 672 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 HALP42357 657 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ABCG1P45844 678 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 MAPK9P45984 424 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 GFERP55789 205 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 SESN2P58004 480 aaPredicted RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 CRADDP78560 199 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 CDK16Q00536 496 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ITIH4Q14624 930 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 DUS1LQ6P1R4 473 aaKnown RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 AFTPHQ6ULP2 937 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 NCSTNQ92542 709 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ANP32BQ92688 251 aaKnown RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 PMEPA1Q969W9 287 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 CXorf40BQ96DE9 158 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 SGSM3Q96HU1 749 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 INSM2Q96T92 566 aaPredicted RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 NAP1L3Q99457 506 aaPredicted RBP20.57■□□□□ 0.88
SIKE1-208ENST00000475335 WWP1Q9H0M0 922 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 TREX1Q9NSU2 369 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 FOXJ2Q9P0K8 574 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ACSL5Q9ULC5 683 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 PRSS21Q9Y6M0 314 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 ADAMTS20P59510 1910 aa20.57■□□□□ 0.88
SIKE1-208ENST00000475335 C17orf113A0A1B0GUU1 675 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 NVLO15381 856 aaKnown RBP20.56■□□□□ 0.88
SIKE1-208ENST00000475335 TMEM63AO94886 807 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 UBXN7O94888 489 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 FGF3P11487 239 aaPredicted RBP20.56■□□□□ 0.88
SIKE1-208ENST00000475335 CAPZBP47756 277 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 VPS41P49754 854 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 SEMA3AQ14563 771 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 PCID2Q5JVF3 399 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 ANKRD22Q5VYY1 191 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 CAPRIN2Q6IMN6 1127 aaKnown RBP20.56■□□□□ 0.88
SIKE1-208ENST00000475335 NLRP9Q7RTR0 991 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 BMPERQ8N8U9 685 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 PPHLN1Q8NEY8 458 aaKnown RBP20.56■□□□□ 0.88
SIKE1-208ENST00000475335 RSC1A1Q92681 617 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 COG4Q9H9E3 785 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 CHRAC1Q9NRG0 131 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 FAM8A1Q9UBU6 413 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 LHX6Q9UPM6 363 aa20.56■□□□□ 0.88
SIKE1-208ENST00000475335 CFAP20Q9Y6A4 193 aaKnown RBP20.56■□□□□ 0.88
SIKE1-208ENST00000475335 FANCGO15287 622 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 PRAMEF10O60809 474 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 PHF2O75151 1096 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 AP2A2O94973 939 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 KRT14P02533 472 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 TYRP1P17643 537 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 GPS1Q13098 491 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 LRRC8BQ6P9F7 803 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 CCDC137Q6PK04 289 aaKnown RBP20.55■□□□□ 0.88
SIKE1-208ENST00000475335 AGBL5Q8NDL9 886 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 KCNE4Q8WWG9 221 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 CPT1BQ92523 772 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 NAF1Q96HR8 494 aaKnown RBP20.55■□□□□ 0.88
SIKE1-208ENST00000475335 CCM2Q9BSQ5 444 aa20.55■□□□□ 0.88
SIKE1-208ENST00000475335 B3GNT4Q9C0J1 378 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms