RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 DCTN3O75935 186 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 CDK14O94921 469 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 GSTM1P09488 218 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 MPSTP25325 297 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 CTSCP53634 463 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ALDH18A1P54886 795 aaKnown RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 GSTM4Q03013 218 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ZP2Q05996 745 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 HSPA14Q0VDF9 509 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 IFT88Q13099 833 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 SGCGQ13326 291 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 IRF4Q15306 451 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 WSCD2Q2TBF2 565 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM259Q4ZIN3 620 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF678Q5SXM1 525 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 NEK5Q6P3R8 708 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM220Q6QAJ8 160 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ATG14Q6ZNE5 492 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ADGRG6Q86SQ4 1221 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 HEATR4Q86WZ0 1026 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 HORMAD1Q86X24 394 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 SYNPOQ8N3V7 929 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 BEND7Q8N7W2 519 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF781Q8N8C0 355 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 PLA2G15Q8NCC3 412 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ASZ1Q8WWH4 475 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 COX14Q96I36 57 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF514Q96K75 400 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 RMDN2Q96LZ7 410 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 CCM2Q9BSQ5 444 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 C1QTNF2Q9BXJ5 285 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 WWP1Q9H0M0 922 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 OR2AG1Q9H205 316 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 GSTO2Q9H4Y5 243 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 EML4Q9HC35 981 aaKnown RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 POLMQ9NP87 494 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 ACSS2Q9NR19 701 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 PNPOQ9NVS9 261 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 HAO1Q9UJM8 370 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-210ENST00000475329 OARD1Q9Y530 152 aa13.5□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3DA0A087WVF3 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3IA0A087WXS9 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3EA0A087X179 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3KA0A087X1G2 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3FA6NER0 549 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 CHURC1-FNTBB4DL54 471 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3LB9A6J9 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 KIAA0754O94854 1291 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 SUPT7LO94864 414 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 C8GP07360 202 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3HP0C7X1 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 CHRNB1P11230 501 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 ALOX15P16050 662 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 GABRG2P18507 467 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 EEF1DP29692 281 aaKnown RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 CCR10P46092 362 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 DGKEP52429 567 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 AQP5P55064 265 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 CDK3Q00526 305 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 SP140Q13342 867 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 SETDB1Q15047 1291 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TGFBIQ15582 683 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 PPP1R3AQ16821 1122 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 UNC50Q53HI1 259 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3GQ6DHY5 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3CQ6IPX1 549 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 CYHR1Q6ZMK1 362 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 Q6ZS52 159 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 FAM124AQ86V42 546 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TRAPPC5Q8IUR0 188 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TBC1D3Q8IZP1 549 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 AFAP1L2Q8N4X5 818 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 TP53I13Q8NBR0 393 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 GLMNQ92990 594 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 MOCOSQ96EN8 888 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 SHDQ96IW2 340 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 LENG8Q96PV6 779 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 ASB2Q96Q27 587 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 SLC17A9Q9BYT1 436 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 OSBPL6Q9BZF3 934 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 STN1Q9H668 368 aaKnown RBP13.49□□□□□ -0.25
TRAF4-210ENST00000475329 KCNK13Q9HB14 408 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 DNAJC28Q9NX36 388 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 FBXL21Q9UKT6 434 aa13.49□□□□□ -0.25
TRAF4-210ENST00000475329 PABPN1LA6NDY0 278 aaKnown RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 NCF1BA6NI72 391 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 CCT8L1PA6NM43 557 aa13.48□□□□□ -0.25
TRAF4-210ENST00000475329 NCF1CA8MVU1 366 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-210ENST00000475329 SLCO1B7G3V0H7 640 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms