RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ZDHHC4Q9NPG8 344 aa10.06□□□□□ -0.8
PCCB-213ENST00000475214 IKZF3Q9UKT9 509 aa10.06□□□□□ -0.8
PCCB-213ENST00000475214 TMPRSS11EQ9UL52 423 aa10.06□□□□□ -0.8
PCCB-213ENST00000475214 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
PCCB-213ENST00000475214 FADS3Q9Y5Q0 445 aa10.06□□□□□ -0.8
PCCB-213ENST00000475214 PABPN1LA6NDY0 278 aaKnown RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 CFAP73A6NFT4 308 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 NCF1BA6NI72 391 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 NCF1CA8MVU1 366 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 FADS2P1A8MWK0 482 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 H0YHG0 523 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 PLK4O00444 970 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 SPINT1O43278 529 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 GRID2O43424 1007 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 GALR2O43603 387 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 TSPAN6O43657 245 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 AP1G1O43747 822 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 MMP20O60882 483 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 UNC5CO95185 931 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 MPC1LP0DKB6 136 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 NCF1P14598 390 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 GM2AP17900 193 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 DRD1P21728 446 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 AOAHP28039 575 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 NTSR1P30989 418 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 P2RY2P41231 377 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 GPR1P46091 355 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 SATB1Q01826 763 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 CREB5Q02930 508 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 DPTQ07507 201 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 CNTN1Q12860 1018 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 TMEM115Q12893 351 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 TUBB3Q13509 450 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 SPRED3Q2MJR0 410 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 ACSBG2Q5FVE4 666 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 PLEKHS1Q5SXH7 462 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 PIP5KL1Q5T9C9 394 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 VWA5B1Q5TIE3 1220 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 ZNF776Q68DI1 518 aaPredicted RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 HDDC3Q8N4P3 179 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 NAT14Q8WUY8 206 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 CCDC28BQ9BUN5 200 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 C1QTNF3Q9BXJ4 246 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 ZCCHC2Q9C0B9 1178 aaKnown RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 NMUR2Q9GZQ4 415 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 FBRSQ9HAH7 460 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 TCF7L2Q9NQB0 619 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 UTP6Q9NYH9 597 aaKnown RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 CDYLQ9Y232 598 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 COQ6Q9Y2Z9 468 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 OARD1Q9Y530 152 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 TNPO3Q9Y5L0 923 aaKnown RBP10.05□□□□□ -0.8
PCCB-213ENST00000475214 CAPN7Q9Y6W3 813 aa10.05□□□□□ -0.8
PCCB-213ENST00000475214 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 MYO1CO00159 1063 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 STK25O00506 426 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 GIPC1O14908 333 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 INPP4BO15327 924 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 MID1O15344 667 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 FFAR2O15552 330 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 ATG13O75143 517 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 MTX2O75431 263 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 TM7SF2O76062 418 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 SIX3O95343 332 aaPredicted RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 MLYCDO95822 493 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 FGF4P08620 206 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 RPS17P08708 135 aaKnown RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 ESRRAP11474 423 aaPredicted RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 SRFP11831 508 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 NCF2P19878 526 aaPredicted RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 CALB2P22676 271 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 TARSP26639 723 aaKnown RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 CCR7P32248 378 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 HK3P52790 923 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 CDH13P55290 713 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 NCALDP61601 193 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 CLCQ05315 142 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 HSPA14Q0VDF9 509 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 GRSF1Q12849 480 aaKnown RBP eCLIP10.04□□□□□ -0.8
PCCB-213ENST00000475214 GTF2H3Q13889 308 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 PON2Q15165 354 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 PDCD2Q16342 344 aaPredicted RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 SLC9B1Q4ZJI4 515 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 C2orf27AQ580R0 203 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 RAET1GQ6H3X3 334 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 CYHR1Q6ZMK1 362 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 RPS27LQ71UM5 84 aaKnown RBP10.04□□□□□ -0.8
PCCB-213ENST00000475214 CLYBLQ8N0X4 340 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 SLC44A3Q8N4M1 653 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 OR56A4Q8NGH8 313 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 OR2T3Q8NH03 318 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 MAPK15Q8TD08 544 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 ASZ1Q8WWH4 475 aa10.04□□□□□ -0.8
PCCB-213ENST00000475214 ELMO1Q92556 727 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms