RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 IQCF5A8MTL0 148 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM114B3SHH9 223 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 GPR89AB7ZAQ6 455 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CFAP99D6REC4 459 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 E5RI56 91 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 GFYI3L273 518 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 K7ESM1 405 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NDUFAB1O14561 156 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CHUKO15111 745 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CAPN5O15484 640 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 LATO43561 262 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 LZTS3O60299 673 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NPHS1O60500 1241 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 RNASEH2AO75792 299 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 IPO13O94829 963 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SLC25A14O95258 325 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 VIMP08670 466 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 GPR89BP0CG08 455 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TPBGLP0DKB5 382 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 MPC1LP0DKB6 136 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 MYL2P10916 166 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ALOX15P16050 662 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 GABRG2P18507 467 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NDUFV2P19404 249 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TFEBP19484 476 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CHRM3P20309 590 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 IMPDH1P20839 514 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 DGKAP23743 735 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TARSP26639 723 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 RGS4P49798 205 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 DGKEP52429 567 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NAA20P61599 178 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 PPARDQ03181 441 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ASPHQ12797 758 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM115Q12893 351 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 STX3Q13277 289 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 LRRC32Q14392 662 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 GAS6Q14393 721 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 OR4D1Q15615 310 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CHI3L2Q15782 390 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 PPP1R3AQ16821 1122 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TTLL9Q3SXZ7 439 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TTC31Q49AM3 519 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ACSBG2Q5FVE4 666 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 METTL2BQ6P1Q9 378 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 PNCKQ6P2M8 343 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SBSNQ6UWP8 590 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NAPRTQ6XQN6 538 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 PIWIL4Q7Z3Z4 852 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CPLX4Q7Z7G2 160 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ADGRG6Q86SQ4 1221 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TAX1BP1Q86VP1 789 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TRIM69Q86WT6 500 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 HORMAD1Q86X24 394 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SLC22A9Q8IVM8 553 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 CPNE9Q8IYJ1 553 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 UBALD2Q8IYN6 164 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 LSMEM2Q8N112 164 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SPATA6LQ8N4H0 392 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ZBTB2Q8N680 514 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 RASGEF1AQ8N9B8 481 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 DENND6BQ8NEG7 585 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 EEF1AKMT1Q8WVE0 214 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SHDQ96IW2 340 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF514Q96K75 400 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SORT1Q99523 831 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TRMOQ9BU70 441 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 TSSK1BQ9BXA7 367 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 C20orf27Q9GZN8 174 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 NSRP1Q9H0G5 558 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 SGK2Q9HBY8 427 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 LTB4R2Q9NPC1 389 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 FGFR1OP2Q9NVK5 253 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 EBF1Q9UH73 591 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 IKZF3Q9UKT9 509 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 MRPS17Q9Y2R5 130 aaKnown RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 COQ6Q9Y2Z9 468 aa6.51□□□□□ -1.37
ATG4A-207ENST00000474825 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
ATG4A-207ENST00000474825 MYO10Q9HD67 2058 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 A0A1W2PQU0 124 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 WDR91A4D1P6 747 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SYCE1LA8MT33 242 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 STX16-NPEPL1H3BU86 382 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 NEMP1O14524 444 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF195O14628 629 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 STX16O14662 325 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SLC16A5O15375 505 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ITM2AO43736 263 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ATG13O75143 517 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 FTH1P02794 183 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 MSH3P20585 1137 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CD72P21854 359 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 GPR1P46091 355 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 RPS9P46781 194 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 GLRBP48167 497 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SLC1A6P48664 564 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 TPMTP51580 245 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CCR3P51677 355 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms