RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 KRT14P02533 472 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 ADRA1DP25100 572 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 FOXN2P32314 431 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 CSTF2P33240 577 aaKnown RBP eCLIP15.68■□□□□ 0.1
ITGB1-210ENST00000474568 PRLHRP49683 370 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 EPHA4P54764 986 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 GFERP55789 205 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 GPS1Q13098 491 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 GPR18Q14330 331 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 CLPPQ16740 277 aaPredicted RBP15.68■□□□□ 0.1
ITGB1-210ENST00000474568 IGF2-ASQ6U949 168 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 FAM129CQ86XR2 697 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 SPACA3Q8IXA5 215 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 SPDYE1Q8NFV5 336 aaPredicted RBP15.68■□□□□ 0.1
ITGB1-210ENST00000474568 OR6P1Q8NGX9 317 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 OR2L2Q8NH16 312 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 C12orf66Q96MD2 445 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 INSM2Q96T92 566 aaPredicted RBP15.68■□□□□ 0.1
ITGB1-210ENST00000474568 C19orf43Q9BQ61 176 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
ITGB1-210ENST00000474568 CHRAC1Q9NRG0 131 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 OGFRQ9NZT2 677 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 FOXJ2Q9P0K8 574 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 PRSS21Q9Y6M0 314 aa15.68■□□□□ 0.1
ITGB1-210ENST00000474568 EFCAB7A8K855 629 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 UBXN7O94888 489 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 MGAT1P26572 445 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 COILP38432 576 aaPredicted RBP15.67■□□□□ 0.1
ITGB1-210ENST00000474568 SQSTM1Q13501 440 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 TRA2AQ13595 282 aaKnown RBP eCLIP15.67■□□□□ 0.1
ITGB1-210ENST00000474568 GSE1Q14687 1217 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 METRNLQ641Q3 311 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 AFTPHQ6ULP2 937 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 XKR5Q6UX68 686 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 C4orf22Q6V702 233 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 CLEC14AQ86T13 490 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 HEXDCQ8WVB3 486 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 RSC1A1Q92681 617 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 PMEPA1Q969W9 287 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 RMDN2Q96LZ7 410 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 TGM7Q96PF1 710 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 DPYSL5Q9BPU6 564 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 SLC40A1Q9NP59 571 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 OCIAD1Q9NX40 245 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 SNX12Q9UMY4 172 aa15.67■□□□□ 0.1
ITGB1-210ENST00000474568 ANKRD11Q6UB99 2663 aaPredicted RBP15.67■□□□□ 0.1
ITGB1-210ENST00000474568 ZFC3H1O60293 1989 aaKnown RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 IGLV3-16A0A075B6K0 115 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 HGSO14964 777 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 SLC35G4P0C7Q5 338 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 FGF3P11487 239 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 MTHFD1P11586 935 aaKnown RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 LEPRP48357 1165 aaKnown RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 GNG11P61952 73 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 PRAMEP78395 509 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 TLE3Q04726 772 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 LAMB3Q13751 1172 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 PLCL1Q15111 1095 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 PCID2Q5JVF3 399 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 ANKRD22Q5VYY1 191 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 WDR74Q6RFH5 385 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 CES3Q6UWW8 571 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 NAPRTQ6XQN6 538 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 ZNF534Q76KX8 674 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 LDB1Q86U70 411 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 ZFAND4Q86XD8 727 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 AGBL5Q8NDL9 886 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 HM13Q8TCT9 377 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 ART4Q93070 314 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■■ 27.5
ITGB1-210ENST00000474568 TMEM159Q96B96 161 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 RNF31Q96EP0 1072 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 LINC00615Q96LM1 132 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 NAP1L3Q99457 506 aaPredicted RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 CCM2Q9BSQ5 444 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 UCK1Q9HA47 277 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 SYBUQ9NX95 663 aa15.66■□□□□ 0.1
ITGB1-210ENST00000474568 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.66■□□□□ 0.1
ITGB1-210ENST00000474568 C9orf172C9J069 976 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 CAPN5O15484 640 aaPredicted RBP15.65■□□□□ 0.1
ITGB1-210ENST00000474568 OR1I1O60431 355 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 ITGB6P18564 788 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 TPSB2P20231 275 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 PSMA3P25788 255 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 NMBRP28336 390 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 MLLT3P42568 568 aaPredicted RBP15.65■□□□□ 0.1
ITGB1-210ENST00000474568 PREPP48147 710 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 SEPHS1P49903 392 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 KRT33BQ14525 404 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 SEMA3AQ14563 771 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 BRD3Q15059 726 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 TGIF1Q15583 401 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 TPSAB1Q15661 275 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 IRGCQ6NXR0 463 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 PDZD3Q86UT5 571 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 OR4L1Q8NH43 312 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 ACTRT1Q8TDG2 376 aa15.65■□□□□ 0.1
ITGB1-210ENST00000474568 CAPZA3Q96KX2 299 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms