RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IRF3Q14653 427 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 STPG1Q5TH74 334 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 WDR78Q5VTH9 848 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TMCO3Q6UWJ1 677 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF771Q7L3S4 317 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ATG9AQ7Z3C6 839 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ADGRA1Q86SQ6 560 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 C17orf53Q8N3J3 647 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 GBGT1Q8N5D6 347 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 HMGCLL1Q8TB92 370 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 PRPF31Q8WWY3 499 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 RSRC1Q96IZ7 334 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ST6GAL2Q96JF0 529 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 DUX3Q96PT4 197 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 NEK1Q96PY6 1258 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC22A12Q96S37 553 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 GFI1Q99684 422 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 NUDT16L1Q9BRJ7 211 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 HGH1Q9BTY7 390 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TRMT61BQ9BVS5 477 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 SPATC1LQ9H0A9 340 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ZFP57Q9NU63 452 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TAAR2Q9P1P5 351 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TBC1D29Q9UFV1 150 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 PASKQ96RG2 1323 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF541Q9H0D2 1346 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 RSF1Q96T23 1441 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A1W2PQ09 198 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A1W2PR77 199 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 hCG_1807616A0A1W2PRN6 198 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 SYNDIG1LA6NDD5 238 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 GLOD5A6NK44 160 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 IFITM10A6NMD0 228 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 TMEM189-UBE2V1I3L0A0 370 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 IPO8O15397 1037 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 LINC01565O15544 149 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 PAPSS1O43252 624 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 PLPP2O43688 288 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 TSPAN1O60635 241 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 CTSVO60911 334 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 RSL1D1O76021 490 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 CSPG5O95196 566 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 KCNK5O95279 499 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 BAG4O95429 457 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 UMODP07911 640 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 FGF5P12034 268 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 SELLP14151 372 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MMP9P14780 707 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 CBLP22681 906 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MARK3P27448 753 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 CDKN1AP38936 164 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MATR3P43243 847 aaKnown RBP eCLIP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 NRIP1P48552 1158 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 STAT2P52630 851 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 RPS18P62269 152 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 STK4Q13043 487 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MFAP5Q13361 173 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 UBE2V1Q13404 147 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 RBBP5Q15291 538 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 GCNT6Q5T4J0 391 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 NDUFAF5Q5TEU4 345 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 GFI1BQ5VTD9 330 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 ADALQ6DHV7 355 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC27A1Q6PCB7 646 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 HAUS6Q7Z4H7 955 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC24A4Q8NFF2 622 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 GRAPLQ8TC17 118 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 STAMBPL1Q96FJ0 436 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 NODALQ96S42 347 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 PCYT2Q99447 389 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 KCNK15Q9H427 330 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 LRRC4Q9HBW1 653 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 APOBEC3GQ9HC16 384 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 HHATLQ9HCP6 504 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MRPL15Q9P015 296 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 MORF4L1Q9UBU8 362 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 ADD3Q9UEY8 706 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 TSPYL4Q9UJ04 414 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 FAF1Q9UNN5 650 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF711Q9Y462 761 aa3.11□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A0G2JLW4 131 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 ELOVL7A1L3X0 281 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 OR2A25A4D2G3 310 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 PRSS47A8MTI9 375 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 PRR32B1ATL7 298 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 XPNPEP2O43895 674 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 SSX4O60224 188 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 PCDH7O60245 1069 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 PORP16435 677 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 EIF2DP41214 584 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 MMP15P51511 669 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 CALD1Q05682 793 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 BAATQ14032 418 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 FAM98BQ52LJ0 330 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC35E4Q6ICL7 350 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 KLC3Q6P597 504 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 CFAP161Q6P656 301 aa3.1□□□□□ -1.91
ECHDC1-213ENST00000474240 PLXDC2Q6UX71 529 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms