RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IKZF3Q9UKT9 509 aa10.18□□□□□ -0.78
CASC3-204ENST00000474190 PCOLCE2Q9UKZ9 415 aa10.18□□□□□ -0.78
CASC3-204ENST00000474190 KCNK6Q9Y257 313 aa10.18□□□□□ -0.78
CASC3-204ENST00000474190 DNMT3AQ9Y6K1 912 aaPredicted RBP10.18□□□□□ -0.78
CASC3-204ENST00000474190 ATRXP46100 2492 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 LRP4O75096 1905 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CEP192Q8TEP8 1941 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 C17orf113A0A1B0GUU1 675 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 MGAT4DA6NG13 374 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 KMOO15229 486 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CASC3O15234 703 aaKnown RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 AQP9O43315 295 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NOBOXO60393 691 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NDUFS3O75489 264 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 TCEA3O75764 348 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 SLCO2B1O94956 709 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 TNFP01375 233 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ESR1P03372 595 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NUDT17P0C025 328 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 TPBGLP0DKB5 382 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ITGB6P18564 788 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 FDXRP22570 491 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ACADLP28330 430 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 PMLP29590 882 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 AKT1P31749 480 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 GP5P40197 560 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 MAGEA12P43365 314 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CD151P48509 253 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 LIMK2P53671 638 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 EIF3BP55884 814 aaKnown RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 TAS2R39P59534 338 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.78
CASC3-204ENST00000474190 LRP8Q14114 963 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CLCA4Q14CN2 919 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ZKSCAN8Q15776 578 aaPredicted RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 PRRT3Q5FWE3 981 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 METRNLQ641Q3 311 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 IL27RAQ6UWB1 636 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CYHR1Q6ZMK1 362 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CEP128Q6ZU80 1094 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 SH2D5Q6ZV89 423 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CHST15Q7LFX5 561 aaPredicted RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 PIP4P1Q86T03 277 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 LRRC6Q86X45 466 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 TRAPPC5Q8IUR0 188 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NAGSQ8N159 534 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 PPM1NQ8N819 430 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 OR2W6PQ8NHA6 318 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 LMX1AQ8TE12 382 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 HNRNPLLQ8WVV9 542 aaKnown RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 PATE1Q8WXA2 126 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 KCNJ9Q92806 393 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ISL2Q96A47 359 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 FAM136AQ96C01 138 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 VPS39Q96JC1 886 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ZNF514Q96K75 400 aaPredicted RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 RMDN2Q96LZ7 410 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CYTH2Q99418 400 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 PAFAH2Q99487 392 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 GPR22Q99680 433 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 RBBP8Q99708 897 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NRTNQ99748 197 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CPNE1Q99829 537 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CCM2Q9BSQ5 444 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 EDEM2Q9BV94 578 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NUSAP1Q9BXS6 441 aaKnown RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 PPANQ9NQ55 473 aaKnown RBP10.17□□□□□ -0.78
CASC3-204ENST00000474190 PRDM8Q9NQV8 689 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 KLC4Q9NSK0 619 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 TAAR2Q9P1P5 351 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 ZFATQ9P243 1243 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 NCDNQ9UBB6 729 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 GPSM3Q9Y4H4 160 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 PCDHGB2Q9Y5G2 931 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 CSNK1G3Q9Y6M4 447 aa10.17□□□□□ -0.78
CASC3-204ENST00000474190 A0A087WUV0 522 aaPredicted RBP10.16□□□□□ -0.78
CASC3-204ENST00000474190 CCDC151A5D8V7 595 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 FOXO6A8MYZ6 492 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 ALDOAP04075 364 aaKnown RBP10.16□□□□□ -0.78
CASC3-204ENST00000474190 TUBBP07437 444 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 SYPP08247 313 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 MYF5P13349 255 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 PREPP48147 710 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 CSE1LP55060 971 aaKnown RBP10.16□□□□□ -0.78
CASC3-204ENST00000474190 UBE2IP63279 158 aaKnown RBP10.16□□□□□ -0.78
CASC3-204ENST00000474190 NAB1Q13506 487 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 ZNF460Q14592 562 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 BRD3Q15059 726 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 DEFB133Q30KQ1 61 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 HECTD2Q5U5R9 776 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 CAPRIN2Q6IMN6 1127 aaKnown RBP10.16□□□□□ -0.78
CASC3-204ENST00000474190 FBXO38Q6PIJ6 1188 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 ABRAXAS1Q6UWZ7 409 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 WASH2PQ6VEQ5 465 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 AMZ2Q86W34 360 aa10.16□□□□□ -0.78
CASC3-204ENST00000474190 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms