RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 QSOX1O00391 747 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 HOXB3P14651 431 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PSMA3P25788 255 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 FOXN2P32314 431 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CSTF2P33240 577 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 LIMK2P53671 638 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 ERVPABLB-1P60509 514 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 SQSTM1Q13501 440 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 TRA2AQ13595 282 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 ITIH4Q14624 930 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 RPE65Q16518 533 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CERS6Q6ZMG9 384 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 MICALCLQ6ZW33 695 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 TMPRSS9Q7Z410 1059 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CLDN19Q8N6F1 224 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 RCBTB1Q8NDN9 531 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 LINC00615Q96LM1 132 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 SLC40A1Q9NP59 571 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 FRYQ5TBA9 3013 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 IGLV3-16A0A075B6K0 115 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 C17orf113A0A1B0GUU1 675 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 TCRBV7S3A2A0A539 114 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 LILRA5A6NI73 299 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PRR19A6NJB7 356 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 KRT37O76014 449 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 DXOO77932 396 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 UBXN7O94888 489 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 AP2A2O94973 939 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 HGFP14210 728 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 TYRP1P17643 537 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 MLLT3P42568 568 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 MAPK10P53779 464 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PCBP4P57723 403 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 KCNJ11Q14654 390 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PLCL1Q15111 1095 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 AARS2Q5JTZ9 985 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 WDR74Q6RFH5 385 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 ZNF574Q6ZN55 896 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 C12orf66Q96MD2 445 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 DDX47Q9H0S4 455 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CATSPERZQ9NTU4 200 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 SYBUQ9NX95 663 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 KLHL3Q9UH77 587 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 ASIC3Q9UHC3 531 aa13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CFAP20Q9Y6A4 193 aaKnown RBP13.93□□□□□ -0.18
VAMP4-203ENST00000474047 CACNA1GO43497 2377 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 ACACAQ13085 2346 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 URB1O60287 2271 aaKnown RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 PMS2P1A4D2B8 440 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 GOLGA8MH3BSY2 632 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 IFRD1O00458 451 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 HGSO14964 777 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 TLX3O43711 291 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 SGTAO43765 313 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 FTH1P02794 183 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 ITGA2BP08514 1039 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 GSTM1P09488 218 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 OR56A5P0C7T3 313 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 CSF2RBP32927 897 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 GSTM4Q03013 218 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 ACVR1Q04771 509 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 GPR18Q14330 331 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 TMEM164Q5U3C3 297 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 KLHL7Q8IXQ5 586 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 AGBL5Q8NDL9 886 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 CPT1BQ92523 772 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 TSSK1BQ9BXA7 367 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 TMEM9Q9P0T7 183 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 HEBP2Q9Y5Z4 205 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 COLEC10Q9Y6Z7 277 aa13.92□□□□□ -0.18
VAMP4-203ENST00000474047 COL27A1Q8IZC6 1860 aaPredicted RBP13.92□□□□□ -0.18
VAMP4-203ENST00000474047 SDR42E2A6NKP2 422 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
VAMP4-203ENST00000474047 AVILO75366 819 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 MTHFD1P11586 935 aaKnown RBP13.91□□□□□ -0.18
VAMP4-203ENST00000474047 PAMP19021 973 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 NMBRP28336 390 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 MAGEA6P43360 314 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 TTPAP49638 278 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 CFHR1Q03591 330 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 C16orf72Q14CZ0 275 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 ANKRD22Q5VYY1 191 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 KLHL35Q6PF15 583 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 IGF2-ASQ6U949 168 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 PACS1Q6VY07 963 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 ZNF248Q8NDW4 579 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
VAMP4-203ENST00000474047 ELMO1Q92556 727 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 RUNDC3BQ96NL0 473 aa13.91□□□□□ -0.18
VAMP4-203ENST00000474047 INSM2Q96T92 566 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms