RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 GLT6D1Q7Z4J2 308 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RTN4RL1Q86UN2 441 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CUZD1Q86UP6 607 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TMEM126BQ8IUX1 230 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CEP97Q8IW35 865 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF683Q8IZ20 524 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ST13P4Q8IZP2 240 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CENPLQ8N0S6 344 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PGAM4Q8N0Y7 254 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RYBPQ8N488 228 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PCYOX1LQ8NBM8 494 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 HJURPQ8NCD3 748 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ICA1LQ8NDH6 482 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 DBF4BQ8NFT6 615 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 OR4L1Q8NH43 312 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 RHEBL1Q8TAI7 183 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ARRDC2Q8TBH0 407 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 STAG3L4Q8TBR4 150 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CD99L2Q8TCZ2 262 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 WDR60Q8WVS4 1066 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 IGSF8Q969P0 613 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PPP2R3CQ969Q6 453 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 L3HYPDHQ96EM0 354 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SGF29Q96ES7 293 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CAPNS2Q96L46 248 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF570Q96NI8 536 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CATSPER2Q96P56 530 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CASD1Q96PB1 797 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PANX3Q96QZ0 392 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 NDNQ99608 321 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 MGME1Q9BQP7 344 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC25A23Q9BV35 468 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 KLHL4Q9C0H6 718 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TGIF2Q9GZN2 237 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TFB2MQ9H5Q4 396 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 IGSF5Q9NSI5 407 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 UTP6Q9NYH9 597 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 C6orf203Q9P0P8 240 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PDP2Q9P2J9 529 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 AFF4Q9UHB7 1163 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TRMT6Q9UJA5 497 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 VPS28Q9UK41 221 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 AGO1Q9UL18 857 aaKnown RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 TBC1D30Q9Y2I9 924 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 FIS1Q9Y3D6 152 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 PKP3Q9Y446 797 aa5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 COL4A4P53420 1690 aaPredicted RBP5.84□□□□□ -1.47
ATPAF1-204ENST00000474020 CUL9Q8IWT3 2517 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 A0A088AWK7 358 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PABPN1LA6NDY0 278 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 E5RI56 91 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 H0Y626 953 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PSMD12O00232 456 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CBX4O00257 560 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ZNF195O14628 629 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 GRID2O43424 1007 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 KERAO60938 352 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 TBX10O75333 385 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 SKAP2O75563 359 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PDE5AO76074 875 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 MLYCDO95822 493 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 TBX18O95935 607 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PEX11BO96011 259 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 GOT2P00505 430 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 URODP06132 367 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CHRNGP07510 517 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 GALTP07902 379 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ATXN1LP0C7T5 689 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ZDHHC11BP0C7U3 371 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 MSL3P1P0C860 447 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 MBL2P11226 248 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ENO3P13929 434 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 GM2AP17900 193 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PI3P19957 117 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 LPOP22079 712 aaPredicted RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 GABRB3P28472 473 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 EPHA3P29320 983 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CORO1AP31146 461 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CPOXP36551 454 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 NUMBP49757 651 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CSRP3P50461 194 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 SCNN1BP51168 640 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 STC1P52823 247 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 INHBCP55103 352 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 MTTPP55157 894 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 AP1S1P61966 158 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 HERVK_113P63132 956 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ACVR1Q04771 509 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 PTK2BQ14289 1009 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 FASTKQ14296 549 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 ZNF460Q14592 562 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 TRIP10Q15642 601 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 KIF19Q2TAC6 998 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 RBM20Q5T481 1227 aaKnown RBP5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 CES4AQ5XG92 561 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 SLC8B1Q6J4K2 584 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 RETSATQ6NUM9 610 aa5.83□□□□□ -1.48
ATPAF1-204ENST00000474020 LILRA6Q6PI73 481 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms