RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 MARK2Q7KZI7 788 aaKnown RBP7.48□□□□□ -1.21
CCDC93-207ENST00000474006 DET1Q7L5Y6 550 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ABI3BPQ7Z7G0 1075 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 SYT9Q86SS6 491 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ZC3HC1Q86WB0 502 aaKnown RBP7.48□□□□□ -1.21
CCDC93-207ENST00000474006 PHYKPLQ8IUZ5 450 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 RBFAQ8N0V3 343 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 RASGEF1AQ8N9B8 481 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 TMEM102Q8N9M5 508 aaPredicted RBP7.48□□□□□ -1.21
CCDC93-207ENST00000474006 MFSD2AQ8NA29 543 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ACVR1CQ8NER5 493 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 DCAKDQ8WVC6 231 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 LPGAT1Q92604 370 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 KLHDC7BQ96G42 594 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ATXN7L3BQ96GX2 97 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 BIRC8Q96P09 236 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ZIM3Q96PE6 472 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 TMEM109Q9BVC6 243 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 BHLHE41Q9C0J9 482 aaPredicted RBP7.48□□□□□ -1.21
CCDC93-207ENST00000474006 CLPBQ9H078 707 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 P2RY12Q9H244 342 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 TM9SF3Q9HD45 589 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 TMEM74BQ9NUR3 256 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ZNF180Q9UJW8 692 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 VWA7Q9Y334 891 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 MYO18AQ92614 2054 aaKnown RBP7.48□□□□□ -1.21
CCDC93-207ENST00000474006 ATG2BQ96BY7 2078 aa7.48□□□□□ -1.21
CCDC93-207ENST00000474006 A0A1W2PR77 199 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 HMX2A2RU54 273 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SMIM23A6NLE4 172 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 OR2AG2A6NM03 316 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 A6NNZ2 444 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 IQCF5A8MTL0 148 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 AGPSO00116 658 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 TLR4O00206 839 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 MAP2K7O14733 419 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SGTAO43765 313 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 NUAK1O60285 661 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 POP7O75817 140 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 KRT38O76015 456 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 AP2A2O94973 939 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ESR1P03372 595 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ITGA2BP08514 1039 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 THEGLP0DJG4 465 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ARAFP10398 606 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PKMP14618 531 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CHRM3P20309 590 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SAT1P21673 171 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 RPS3P23396 243 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 HTR1BP28222 390 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SERPINB9P50453 376 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CTSCP53634 463 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CSE1LP55060 971 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 KIAA1024LP59773 190 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ZNF844Q08AG5 666 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 OVGP1Q12889 678 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PTK2BQ14289 1009 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CTSL3PQ5NE16 218 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CEP85LQ5SZL2 805 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 RBM20Q5T481 1227 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 HECTD2Q5U5R9 776 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PTRHD1Q6GMV3 140 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 KYAT3Q6YP21 454 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 MACC1Q6ZN28 852 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PRR23BQ6ZRT6 265 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 IQCHQ86VS3 1027 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 TDRPQ86YL5 185 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 DCP2Q8IU60 420 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 BEND7Q8N7W2 519 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 GPATCH11Q8N954 259 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PIGKQ92643 395 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 TSACCQ96A04 125 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 VPS39Q96JC1 886 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ELMO2Q96JJ3 720 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 NDNQ99608 321 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 RBBP8Q99708 897 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 RHOJQ9H4E5 214 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 VIPAS39Q9H9C1 493 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 MRPL40Q9NQ50 206 aaKnown RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ZNF446Q9NWS9 450 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 GALPQ9UBC7 116 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 TBK1Q9UHD2 729 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 ZNHIT2Q9UHR6 403 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 MOSPD1Q9UJG1 213 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PILRBQ9UKJ0 227 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 GPR34Q9UPC5 381 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SLC17A4Q9Y2C5 497 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PRKAB1Q9Y478 270 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 PCYT1BQ9Y5K3 369 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-207ENST00000474006 R4GN57 208 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 CKAP5Q14008 2032 aa7.47□□□□□ -1.21
CCDC93-207ENST00000474006 SPTY2D1-AS1A0A0U1RR47 76 aa7.46□□□□□ -1.22
CCDC93-207ENST00000474006 IQANK1A0A1B0GTG1 560 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms