RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 UBA6A0AVT1 1052 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 OR52A4PA6NMU1 304 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 NTN3O00634 580 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 B4GAT1O43505 415 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 DUX1O43812 170 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 CPNE6O95741 557 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 TTC4O95801 387 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 AMD1P17707 334 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 PGAM1P18669 254 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 IVDP26440 423 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 MAGEA3P43357 314 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 MAPK9P45984 424 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 INHBCP55103 352 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 PLOD1Q02809 727 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 NR1D2Q14995 579 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 HIF1AQ16665 826 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 LONRF1Q17RB8 773 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 ISXQ2M1V0 245 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 HIBCHQ6NVY1 386 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 NEPROQ6NW34 567 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 FAM83HQ6ZRV2 1179 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 USP53Q70EK8 1073 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 LRRC6Q86X45 466 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
USF1-205ENST00000473969 ELMO1Q92556 727 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 C12orf66Q96MD2 445 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 TCF12Q99081 682 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 WWP1Q9H0M0 922 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 EPB41L1Q9H4G0 881 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 IMP3Q9NV31 184 aaKnown RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 AKAP7Q9P0M2 348 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 SCHIP1Q9P0W5 487 aaPredicted RBP13.48□□□□□ -0.25
USF1-205ENST00000473969 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 AK5Q9Y6K8 562 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 COLEC10Q9Y6Z7 277 aa13.48□□□□□ -0.25
USF1-205ENST00000473969 IGHV1OR21-1A0A087WYE8 117 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 A0A1W2PQM1 296 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 D6RAR5 112 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 GOLGA8TH3BQL2 631 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 LIN7AO14910 233 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 RAD51CO43502 376 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 SGTAO43765 313 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 OR1I1O60431 355 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 BRAFP15056 766 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 OGNP20774 298 aaKnown RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 NDUFS1P28331 727 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 SLC19A1P41440 591 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 EPHA4P54764 986 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 MRPS25P82663 173 aaKnown RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 RPA4Q13156 261 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 SEMA3AQ14563 771 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 CLCA4Q14CN2 919 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 RPE65Q16518 533 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 PHF19Q5T6S3 580 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 MICALCLQ6ZW33 695 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 LDB1Q86U70 411 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 TMEM135Q86UB9 458 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 LMNTD2Q8IXW0 634 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 NCSTNQ92542 709 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 LRRC39Q96DD0 335 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 NXPE2Q96DL1 559 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 CCDC97Q96F63 343 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 SIGLEC10Q96LC7 697 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 PANX3Q96QZ0 392 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 NRSN2Q9GZP1 204 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 COG4Q9H9E3 785 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 UCK1Q9HA47 277 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
USF1-205ENST00000473969 WDR37Q9Y2I8 494 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 PRSS21Q9Y6M0 314 aa13.47□□□□□ -0.25
USF1-205ENST00000473969 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 NCOR2Q9Y618 2525 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 TRABD2BA6NFA1 517 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 LILRA5A6NI73 299 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 PRR19A6NJB7 356 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 H3BMM5 538 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 MTHFD1P11586 935 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 CD1CP29017 333 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 EIF3BP55884 814 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 UBE2IP63279 158 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.25
USF1-205ENST00000473969 BRD3Q15059 726 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 PLCL1Q15111 1095 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 TMED2Q15363 201 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 SPANXN3Q5MJ09 141 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 NKAIN2Q5VXU1 208 aa13.46□□□□□ -0.25
USF1-205ENST00000473969 C8orf74Q6P047 294 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms