RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 C18orf63Q68DL7 685 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 TEX38Q6PEX7 206 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 FAM198BQ6UWH4 519 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SUSD1Q6UWL2 747 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF534Q76KX8 674 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 SPATA19Q7Z5L4 167 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 PHLDB2Q86SQ0 1253 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 GLRX5Q86SX6 157 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 NRROSQ86YC3 692 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 KLHL7Q8IXQ5 586 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CCDC170Q8IYT3 715 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CHCHD4Q8N4Q1 142 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 MOSPD2Q8NHP6 518 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 C9orf43Q8TAL5 461 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 DDB2Q92466 427 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 EXT2Q93063 718 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 OR6C1Q96RD1 312 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 FNDC11Q9BVV2 318 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 FOXP1Q9H334 677 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ST6GALNAC4Q9H4F1 302 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 CPSF3Q9UKF6 684 aaKnown RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 AGO1Q9UL18 857 aaKnown RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 AMDHD2Q9Y303 409 aa4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ASTN2O75129 1339 aaPredicted RBP4.15□□□□□ -1.75
BRCA1-212ENST00000473961 ANKUB1A6NFN9 424 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 OR6C76A6NM76 312 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 H0YAE9 185 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 J3KR12 359 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 SOCS6O14544 535 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 RFPL2O75678 378 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 LCATP04180 440 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 RAB40ALP0C0E4 278 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 PRF1P14222 555 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 MYL6BP14649 208 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 CDC25AP30304 524 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 AMPHP49418 695 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 NAGLUP54802 743 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 PRKCZQ05513 592 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ACSM1Q08AH1 577 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 TUBB2AQ13885 445 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 HNF4GQ14541 408 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 TWIST1Q15672 202 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 HLFQ16534 295 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 VWC2Q2TAL6 325 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 SMU1Q2TAY7 513 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 KRTCAP3Q53RY4 240 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 NHSL2Q5HYW2 709 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 GCNT6Q5T4J0 391 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 WDR73Q6P4I2 378 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 IYDQ6PHW0 289 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF704Q6ZNC4 412 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 COLCA1Q6ZS62 124 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 PLEKHM3Q6ZWE6 761 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 C1orf52Q8N6N3 182 aaKnown RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF611Q8N823 705 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF713Q8N859 430 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 SLC4A11Q8NBS3 891 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ATAD1Q8NBU5 361 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 CTCFLQ8NI51 663 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 PSMA8Q8TAA3 256 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 SPSB1Q96BD6 273 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 MTERF1Q99551 399 aaKnown RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 SLC25A33Q9BSK2 321 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 DESI2Q9BSY9 194 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 INPP5KQ9BT40 448 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ABHD6Q9BV23 337 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 TUBB2BQ9BVA1 445 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 DCLK3Q9C098 648 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 PRMT7Q9NVM4 692 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ADPRHL2Q9NX46 363 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ERAP1Q9NZ08 941 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 ARMCX3Q9UH62 379 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-212ENST00000473961 TINAGQ9UJW2 476 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 CDH7Q9ULB5 785 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 LIPT1Q9Y234 373 aa4.14□□□□□ -1.75
BRCA1-212ENST00000473961 A0A0U1RQJ8 604 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 BECN2A8MW95 431 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 INO80B-WBP1J3KQ70 363 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SOCS2O14508 198 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 RGS14O43566 566 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 MOCS3O95396 460 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 OR52Z1P0C646 297 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 OR2T7P0C7T2 308 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 DANCRP0C864 163 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 HOXB2P14652 356 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 ATP6V1E1P36543 226 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 HNF4AP41235 474 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 CLDN20P56880 219 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 GPS2Q13227 327 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 CALCRLQ16602 461 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 TYSND1Q2T9J0 566 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 C2orf76Q3KRA6 126 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 TMEM35AQ53FP2 167 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 TDRD12Q587J7 1177 aaKnown RBP4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SLC10A5Q5PT55 438 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 MPP7Q5T2T1 576 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 SHEQ5VZ18 495 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 ALS2CLQ60I27 953 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF626Q68DY1 528 aa4.13□□□□□ -1.75
BRCA1-212ENST00000473961 C8orf82Q6P1X6 216 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms